RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 CDH7Q9ULB5 785 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 PADI3Q9ULW8 664 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 LIPGQ9Y5X9 500 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 ATXN2Q99700 1313 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 HTR3EA5X5Y0 456 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 EIF4E1BA6NMX2 242 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 SOCS5O75159 536 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RSL1D1O76021 490 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 SSTR2P30874 369 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 PRKCIP41743 596 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 FASLGP48023 281 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 GPC3P51654 580 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TAS2R38P59533 333 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 ARF5P84085 180 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 BNC1Q01954 994 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 FOXM1Q08050 763 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TRAF3Q13114 568 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 MAD2L1Q13257 205 aaPredicted RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 CTF1Q16619 201 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 DECR1Q16698 335 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 MYLK3Q32MK0 819 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 TOR1AIP1Q5JTV8 583 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RABEPKQ7Z6M1 372 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 PELI3Q8N2H9 469 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 HDDC3Q8N4P3 179 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RTL3Q8N8U3 475 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 ZNF540Q8NDQ6 660 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 WFIKKN2Q8TEU8 576 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TEKT4Q8WW24 435 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 TAAR8Q969N4 342 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 ARSGQ96EG1 525 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 BICD1Q96G01 975 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 GPR88Q9GZN0 384 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 ANO10Q9NW15 660 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 ARMCX3Q9UH62 379 aaPredicted RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 IL19Q9UHD0 177 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 KCNK7Q9Y2U2 307 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RRP15Q9Y3B9 282 aaKnown RBP5.03□□□□□ -1.6
LSM5-206ENST00000409987 NFS1Q9Y697 457 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RIMBP3CA6NJZ7 1639 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RIMBP3BA6NNM3 1639 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 RIMBP3Q9UFD9 1639 aa5.03□□□□□ -1.6
LSM5-206ENST00000409987 A0A0U1RQJ8 604 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 RNF103-CHMP3A0A140T963 221 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 EDDM13A0A1B0GTR0 161 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 LINC01553A4QN01 128 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 ANXA2P2A6NMY6 339 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 RNF103O00237 685 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 SPRY1O43609 319 aaPredicted RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 SERPINI2O75830 405 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 CRYABP02511 175 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 TYMPP19971 482 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 ITGB8P26012 769 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 HOXA11P31270 313 aaPredicted RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 PGGT1BP53609 377 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 STX1BP61266 288 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 PPP2R2BQ00005 443 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 TEFQ10587 303 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 DHX34Q14147 1143 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 C8orf82Q6P1X6 216 aaPredicted RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 PAPD4Q6PIY7 484 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 PPP1R21Q6ZMI0 780 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 ATG9AQ7Z3C6 839 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 WASF1Q92558 559 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 LPGAT1Q92604 370 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 CSF3RQ99062 836 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 DDOQ99489 341 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 SF3B5Q9BWJ5 86 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 RTN4RQ9BZR6 473 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 SLC5A7Q9GZV3 580 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 PPIL3Q9H2H8 161 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 HIF1ANQ9NWT6 349 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 ACTR3BQ9P1U1 418 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 DBNLQ9UJU6 430 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 MYO6Q9UM54 1294 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 DUSP12Q9UNI6 340 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 ZNF148Q9UQR1 794 aa5.02□□□□□ -1.61
LSM5-206ENST00000409987 WBP11Q9Y2W2 641 aaKnown RBP5.02□□□□□ -1.61
LSM5-206ENST00000409987 A0A087WV48 116 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 FAM90A26D6RGX4 464 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 IFIT3O14879 490 aaKnown RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 BCAS2O75934 225 aaPredicted RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 TRUB2O95900 331 aaKnown RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 GH2P01242 217 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 ZFYP08048 801 aaPredicted RBP5.01□□□□□ -1.61
LSM5-206ENST00000409987 HMOX1P09601 288 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 UGT1A1P22309 533 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 TNFRSF8P28908 595 aa5.01□□□□□ -1.61
LSM5-206ENST00000409987 MATR3P43243 847 aaKnown RBP eCLIP5.01□□□□□ -1.61
LSM5-206ENST00000409987 PCYT1AP49585 367 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms