RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FOXP4Q8IVH2 680 aaPredicted RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 ZDHHC23Q8IYP9 409 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PM20D2Q8IYS1 436 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 OR1J2Q8NGS2 313 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SLC5A11Q8WWX8 675 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 KAT2AQ92830 837 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SLAMF9Q96A28 289 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SPDL1Q96EA4 605 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 DTNBP1Q96EV8 351 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 ZNF560Q96MR9 790 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CRAMP1Q96RY5 1269 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 TCHPQ9BT92 498 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 GTPBP2Q9BX10 602 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 TRIM6Q9C030 488 aaPredicted RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 MVB12BQ9H7P6 319 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 NGBQ9NPG2 151 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 HINT3Q9NQE9 182 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 SOHLH2Q9NX45 425 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SLCO1C1Q9NYB5 712 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 ITM2BQ9Y287 266 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 C2orf92A0A1B0GVN3 265 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 CFAP73A6NFT4 308 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ARHGAP42A6NI28 874 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 AP3B1O00203 1094 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 VWA5AO00534 786 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 IKBKBO14920 756 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 NDUFS4O43181 175 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TSPAN1O60635 241 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TSC22D2O75157 780 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 GCATO75600 419 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 SERPING1P05155 500 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ELFN1P0C7U0 828 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 UNGP13051 313 aaPredicted RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 KRT5P13647 590 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ST6GAL1P15907 406 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 GABRA5P31644 462 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 GMPSP49915 693 aaPredicted RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 INHBCP55103 352 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ACTR1AP61163 376 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TGFB2P61812 414 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 CDK3Q00526 305 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 MTA1Q13330 715 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 LPIN1Q14693 890 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 NR1D2Q14995 579 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 UGP2Q16851 508 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TSTD2Q5T7W7 516 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 DCAF12L2Q5VW00 463 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 PODNL1Q6PEZ8 512 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 NAPRTQ6XQN6 538 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 RBM44Q6ZP01 1051 aaKnown RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 TPRG1Q6ZUI0 275 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 MTSS1LQ765P7 747 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 PHLDB2Q86SQ0 1253 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ARHGEF19Q8IW93 802 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 CFAP206Q8IYR0 622 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 SCCPDHQ8NBX0 429 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 HM13Q8TCT9 377 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 CTNNBL1Q8WYA6 563 aaPredicted RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 PIGKQ92643 395 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 DAZAP1Q96EP5 407 aaKnown RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 NSMCE2Q96MF7 247 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 UROC1Q96N76 676 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 FCRL5Q96RD9 977 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 FEVQ99581 238 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 CPNE1Q99829 537 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 SEMA3CQ99985 751 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 SLX1AQ9BQ83 275 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 MOV10L1Q9BXT6 1211 aaKnown RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 TEX13AQ9BXU3 409 aaPredicted RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 TMEM39BQ9GZU3 492 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 S1PR5Q9H228 398 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 RAD21L1Q9H4I0 556 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 COQ10BQ9H8M1 238 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 SERINC1Q9NRX5 453 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 DPP3Q9NY33 737 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TMOD2Q9NZR1 351 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 FLRT1Q9NZU1 646 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 TBC1D7Q9P0N9 293 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 COX16Q9P0S2 106 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 ANKMY1Q9P2S6 941 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 STK39Q9UEW8 545 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 IPO11Q9UI26 975 aaKnown RBP4.81□□□□□ -1.64
LSM5-205ENST00000409952 NFE2L3Q9Y4A8 694 aa4.81□□□□□ -1.64
LSM5-205ENST00000409952 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 ASTN2O75129 1339 aaPredicted RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 TRBV5-7A0A0A0MS05 114 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 A0A1W2PPQ1 181 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 ANKUB1A6NFN9 424 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 EIF4E1BA6NMX2 242 aaKnown RBP4.8□□□□□ -1.64
LSM5-205ENST00000409952 KBTBD13C9JR72 458 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 M0QZ24 198 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 FOXN1O15353 648 aa4.8□□□□□ -1.64
LSM5-205ENST00000409952 FCGR3BO75015 233 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms