RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 C12orf66Q96MD2 445 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 RAB33BQ9H082 229 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 ZNF768Q9H5H4 540 aaKnown RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 CASS4Q9NQ75 786 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 SLC2A6Q9UGQ3 507 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 PILRAQ9UKJ1 303 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 DRG1Q9Y295 367 aaKnown RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 GCN1Q92616 2671 aaKnown RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 PIKFYVEQ9Y2I7 2098 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 C17orf113A0A1B0GUU1 675 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 CCDC162PA2VCL2 907 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 C1QL1O75973 258 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 SLC35G4P0C7Q5 338 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 CXCR5P32302 372 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 LMAN1P49257 510 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 SH3BP2P78314 561 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 COL9A2Q14055 689 aaPredicted RBP17.29■□□□□ 0.36
LSM5-204ENST00000409909 KCTD19Q17RG1 926 aaPredicted RBP17.29■□□□□ 0.36
LSM5-204ENST00000409909 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 CACHD1Q5VU97 1274 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 IRGCQ6NXR0 463 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 CEACAM20Q6UY09 585 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 PPP1R21Q6ZMI0 780 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 PRSS42Q7Z5A4 293 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 HM13Q8TCT9 377 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 ZDHHC12Q96GR4 267 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 ZNF778Q96MU6 729 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 TEFMQ96QE5 360 aaKnown RBP17.29■□□□□ 0.36
LSM5-204ENST00000409909 CCM2Q9BSQ5 444 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 PAK5Q9P286 719 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 PCDHGA4Q9Y5G9 962 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 PRSS21Q9Y6M0 314 aa17.29■□□□□ 0.36
LSM5-204ENST00000409909 BAHCC1Q9P281 2608 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 HEATR9A2RTY3 570 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 EIF4E1BA6NMX2 242 aaKnown RBP17.28■□□□□ 0.36
LSM5-204ENST00000409909 E7EVH7 732 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 POLR1CO15160 346 aaPredicted RBP17.28■□□□□ 0.36
LSM5-204ENST00000409909 CEP104O60308 925 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 RASSF9O75901 435 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 APRTP07741 180 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
LSM5-204ENST00000409909 FOXN2P32314 431 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 KCNJ1P48048 391 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
LSM5-204ENST00000409909 TIPARPQ7Z3E1 657 aaKnown RBP17.28■□□□□ 0.36
LSM5-204ENST00000409909 CACNA2D3Q8IZS8 1091 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 ZFPM2Q8WW38 1151 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 HDAC10Q969S8 669 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 WBP1Q96G27 269 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 ZPBPQ9BS86 351 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 OR52A5Q9H2C5 316 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 KIR3DX1Q9H7L2 352 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 SMARCAL1Q9NZC9 954 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 SEMA5BQ9P283 1151 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 SLC24A2Q9UI40 661 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 ZKSCAN5Q9Y2L8 839 aa17.28■□□□□ 0.36
LSM5-204ENST00000409909 IGHV5-51A0A0C4DH38 117 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 RAD1O60671 282 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 ADRA1DP25100 572 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 PDHA2P29803 388 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 ATP1A2P50993 1020 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 CYP4F2P78329 520 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 FOXM1Q08050 763 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 PLCL1Q15111 1095 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 TSTD2Q5T7W7 516 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 IL22RA1Q8N6P7 574 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 RNF31Q96EP0 1072 aa17.27■□□□□ 0.36
LSM5-204ENST00000409909 TMEM184BQ9Y519 407 aaPredicted RBP17.27■□□□□ 0.36
LSM5-204ENST00000409909 OR5K3A6NET4 321 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 STK17BO94768 372 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 AP2A2O94973 939 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 GAS8O95995 478 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 LIFP15018 202 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 NELFEP18615 380 aaKnown RBP17.26■□□□□ 0.35
LSM5-204ENST00000409909 PREPP48147 710 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 ACVR1Q04771 509 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 LY6DQ14210 128 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 GSE1Q14687 1217 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 KLHL35Q6PF15 583 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 PRELID2Q8N945 189 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 OR6C1Q96RD1 312 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 NRTNQ99748 197 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 SEMA4CQ9C0C4 833 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 HRASLS2Q9NWW9 162 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 RIMKLBQ9ULI2 386 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 TCAF1Q9Y4C2 921 aa17.26■□□□□ 0.35
LSM5-204ENST00000409909 ZNF462Q96JM2 2506 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 HELZ2Q9BYK8 2649 aaKnown RBP17.25■□□□□ 0.35
LSM5-204ENST00000409909 OR6C74A6NCV1 312 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 OR1I1O60431 355 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 DLGAP3O95886 979 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 GOT2P00505 430 aaKnown RBP17.25■□□□□ 0.35
LSM5-204ENST00000409909 ZNF28P17035 718 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 NSG1P42857 185 aa17.25■□□□□ 0.35
LSM5-204ENST00000409909 LAMB3Q13751 1172 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms