RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MMGT1Q8N4V1 131 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 SPDYE1Q8NFV5 336 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 CALML6Q8TD86 181 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 TSSK1BQ9BXA7 367 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 P2RY12Q9H244 342 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 OR52A5Q9H2C5 316 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 EPB41L5Q9HCM4 733 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ZC3H7BQ9UGR2 993 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 CTAGE15A4D2H0 777 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 LILRA5A6NI73 299 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 E7ESA3 106 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CSO75390 466 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CPNE6O95741 557 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CTAGE8P0CG41 777 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 MTHFD1P11586 935 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PDX1P52945 283 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 EPHA4P54764 986 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PLOD1Q02809 727 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 HP1BP3Q5SSJ5 553 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CENPUQ71F23 418 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CTAGE6Q86UF2 777 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CTAGE4Q8IX94 777 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 OR10G6Q8NH81 332 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 ELMO1Q92556 727 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 LPGAT1Q92604 370 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 RMDN2Q96LZ7 410 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 INSM2Q96T92 566 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 WDR83Q9BRX9 315 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 LRRC1Q9BTT6 524 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CARD6Q9BX69 1037 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 IMP3Q9NV31 184 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 INTS10Q9NVR2 710 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 GNPTGQ9UJJ9 305 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 ATXN7L1Q9ULK2 861 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 S1PR4O95977 384 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CD151P48509 253 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CAV1Q03135 178 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PDIA2Q13087 525 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 NKAIN2Q5VXU1 208 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PTRHD1Q6GMV3 140 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 USP53Q70EK8 1073 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PIM3Q86V86 326 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 ART4Q93070 314 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 C12orf66Q96MD2 445 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 BIRC8Q96P09 236 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 FAM167BQ9BTA0 163 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 EPB41L1Q9H4G0 881 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 RDH14Q9HBH5 336 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 PLAC1Q9HBJ0 212 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 CHMP2BQ9UQN3 213 aa19.41■□□□□ 0.7
PDLIM2-207ENST00000409417 FRYQ5TBA9 3013 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 PRAMEF33A0A0G2JMD5 474 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 UBA6A0AVT1 1052 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC5A10A0PJK1 596 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 IFRD1O00458 451 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 ESR1P03372 595 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 IGF2RP11717 2491 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 PDHA2P29803 388 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 PREPP48147 710 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 EIF3BP55884 814 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC7A5Q01650 507 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 GPR18Q14330 331 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 HSP90AA5PQ58FG0 334 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 UNC5AQ6ZN44 842 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 KCNMB4Q86W47 210 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 DENND6AQ8IWF6 608 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 UNC5BQ8IZJ1 945 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 ZFPM2Q8WW38 1151 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 SEC14L1Q92503 715 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 GATA6Q92908 595 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 AHCYL2Q96HN2 611 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 PANX3Q96QZ0 392 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 DPYSL5Q9BPU6 564 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 PCDHB1Q9Y5F3 818 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 HEBP2Q9Y5Z4 205 aa19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 CFAP20Q9Y6A4 193 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-207ENST00000409417 IQCF5A8MTL0 148 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 H3BMM5 538 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TMX2-CTNND1H3BSU7 103 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 DUX1O43812 170 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 ERVK-10P10266 1014 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 ITGB6P18564 788 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 CCR7P32248 378 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 PLTPP55058 493 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 ZFP36L1Q07352 338 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 CTBP1Q13363 440 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 BOP1Q14137 746 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TRADDQ15628 312 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 MAP9Q49MG5 647 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 SYTL3Q4VX76 610 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 STEAP4Q687X5 459 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TMPRSS9Q7Z410 1059 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 B3GNT8Q7Z7M8 397 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 PDZD3Q86UT5 571 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 NOA1Q8NC60 698 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 GABPB2Q8TAK5 448 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 ASZ1Q8WWH4 475 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TMEM159Q96B96 161 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TMEM74Q96NL1 305 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms