RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CTSEP14091 401 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CHRM3P20309 590 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 IDSP22304 550 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CCR7P32248 378 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CCNFP41002 786 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 GNPDA1P46926 289 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CDKN2DP55273 166 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 TAS2R39P59534 338 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 IL2P60568 153 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 BNC1Q01954 994 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SLC14A1Q13336 389 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SP140Q13342 867 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 TSNAXIP1Q2TAA8 658 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 MROH9Q5TGP6 573 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CRTC3Q6UUV7 619 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 ABRAXAS1Q6UWZ7 409 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 PDZD3Q86UT5 571 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 ZNF548Q8NEK5 533 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 ELMO1Q92556 727 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CCDC97Q96F63 343 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 GPR21Q99679 349 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 LRRC61Q9BV99 259 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 DUSP23Q9BVJ7 150 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SSU72Q9NP77 194 aaKnown RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SNX15Q9NRS6 342 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 DNAAF2Q9NVR5 837 aaKnown RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 NCKIPSDQ9NZQ3 722 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SLC39A10Q9ULF5 831 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 PNMA8BQ9ULN7 279 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 MTO1Q9Y2Z2 717 aaKnown RBP12.78□□□□□ -0.36
LIMS2-203ENST00000409254 SNX11Q9Y5W9 270 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 HEBP2Q9Y5Z4 205 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 RP1P56715 2156 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.36
LIMS2-203ENST00000409254 UNC13CQ8NB66 2214 aa12.77□□□□□ -0.36
LIMS2-203ENST00000409254 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 A6NCN8 305 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 RGS16O15492 202 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 AQP9O43315 295 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 OPA1O60313 960 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 PIAS1O75925 651 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TRIM16O95361 564 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 SLC35G4P0C7Q5 338 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 SLC35E2BP0CK96 405 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ACP5P13686 325 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 NDUFS1P28331 727 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TYK2P29597 1187 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TIAL1Q01085 375 aaKnown RBP eCLIP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 CTBSQ01459 385 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 KIR2DS5Q14953 304 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 CSRP2Q16527 193 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 UNC5DQ6UXZ4 953 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 CHST15Q7LFX5 561 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TBC1D1Q86TI0 1168 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 RBM12BQ8IXT5 1001 aaKnown RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ZFPM2Q8WW38 1151 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ATXN7L3BQ96GX2 97 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 NDNQ99608 321 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 OLFM1Q99784 485 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 DERL2Q9GZP9 239 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 OR52A5Q9H2C5 316 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 GPAMQ9HCL2 828 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 MRPL40Q9NQ50 206 aaKnown RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 MOSPD1Q9UJG1 213 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 TLK1Q9UKI8 766 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 CDYLQ9Y232 598 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.37
LIMS2-203ENST00000409254 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.37
LIMS2-203ENST00000409254 IFRD1O00458 451 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-203ENST00000409254 SCAMP1O15126 338 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 SLC16A5O15375 505 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 KDM1AO60341 852 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 RFPL1O75677 317 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 MATN4O95460 622 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-203ENST00000409254 ALPPL2P10696 532 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 F3P13726 295 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 KRT15P19012 456 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 HALP42357 657 aa12.76□□□□□ -0.37
LIMS2-203ENST00000409254 BOP1Q14137 746 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms