RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SH3BP2P78314 561 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 HERC3Q15034 1050 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CD300LGQ6UXG3 332 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 SLC22A15Q8IZD6 547 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ILVBLA1L0T0 632 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 JRKO75564 520 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 GJB3O75712 270 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ALDH2P05091 517 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 TMBIM6P55061 237 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 TRAF3Q13114 568 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 PCBP1Q15365 356 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ATP6AP1Q15904 470 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 OR10A6Q8NH74 314 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 KCNS3Q9BQ31 491 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 RBM22Q9NW64 420 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 KCTD3Q9Y597 815 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 DNAJC15Q9Y5T4 150 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 SSX4O60224 188 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 LTA4HP09960 611 aaKnown RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 SPNP16150 400 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ADPRMQ3LIE5 342 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ENPP6Q6UWR7 440 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 LINC00523Q86TU6 105 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 C7orf57Q8NEG2 295 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 EXOC2Q96KP1 924 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 MYRFLQ96LU7 910 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 SLX1AQ9BQ83 275 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 MROQ9BYG7 248 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 ZBTB20Q9HC78 741 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
PTPRN-202ENST00000409251 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
PTPRN-202ENST00000409251 A0A1B0GTL3 188 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 SOBPA7XYQ1 873 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ARVCFO00192 962 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CAPN1P07384 714 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 NAT1P18440 290 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CD68P34810 354 aaPredicted RBP12.77□□□□□ -0.36
PTPRN-202ENST00000409251 NUDT6P53370 316 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 TAF10Q12962 218 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ATPAF2Q8N5M1 289 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.36
PTPRN-202ENST00000409251 TMEM246Q9BRR3 403 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 SPON2Q9BUD6 331 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 RNF167Q9H6Y7 350 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 RGS18Q9NS28 235 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CD300AQ9UGN4 299 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 VPS28Q9UK41 221 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CDH7Q9ULB5 785 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 SLC12A8A0AV02 714 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 AZIN1O14977 448 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 FKTNO75072 461 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 LCKP06239 509 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 INHBBP09529 407 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 FCGR1AP12314 374 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 LBPP18428 481 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 HOXC8P31273 242 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 OR1D2P34982 312 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 SLC11A1P49279 550 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 TLE2Q04725 743 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 DAG1Q14118 895 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CCBE1Q6UXH8 406 aaPredicted RBP12.77□□□□□ -0.36
PTPRN-202ENST00000409251 STRADAQ7RTN6 431 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CLEC14AQ86T13 490 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 TBC1D21Q8IYX1 336 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CADM2Q8N3J6 435 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ERVK13-1Q9NX77 482 aa12.77□□□□□ -0.36
PTPRN-202ENST00000409251 ZNF99A8MXY4 864 aaPredicted RBP12.77□□□□□ -0.37
PTPRN-202ENST00000409251 FFAR3O14843 346 aa12.77□□□□□ -0.37
PTPRN-202ENST00000409251 GPR42O15529 346 aa12.77□□□□□ -0.37
PTPRN-202ENST00000409251 BNIP3LO60238 219 aa12.77□□□□□ -0.37
PTPRN-202ENST00000409251 PAMP19021 973 aa12.77□□□□□ -0.37
PTPRN-202ENST00000409251 PRDX3P30048 256 aaKnown RBP12.77□□□□□ -0.37
PTPRN-202ENST00000409251 ST13P50502 369 aaKnown RBP12.77□□□□□ -0.37
PTPRN-202ENST00000409251 AASDHQ4L235 1098 aaPredicted RBP12.77□□□□□ -0.37
PTPRN-202ENST00000409251 SDE2Q6IQ49 451 aa12.77□□□□□ -0.37
PTPRN-202ENST00000409251 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms