RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 GATBO75879 557 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 AMHP03971 560 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 SLC15A1P46059 708 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RPIAP49247 311 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ZNF132P52740 706 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RAPSNQ13702 412 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CAMK1Q14012 370 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 XKRXQ6PP77 449 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CCDC107Q8WV48 283 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 SNTG1Q9NSN8 517 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 THUMPD1Q9NXG2 353 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 PCDHGA3Q9Y5H0 932 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ISM1B1AKI9 464 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 WRBO00258 174 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 PAPSS2O95340 614 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 RPS14P62263 151 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 EIF5AL1Q6IS14 154 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 LIX1Q8N485 282 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 SPPL2BQ8TCT7 592 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 EXOC2Q96KP1 924 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 CREB1P16220 341 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 AMD1P17707 334 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 ITPKAP23677 461 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 PTGER3P43115 390 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 MXD1Q05195 221 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 HNRNPDQ14103 355 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 NPTX1Q15818 432 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 MPPE1Q53F39 396 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 NOMO2Q5JPE7 1267 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 DMRTB1Q96MA1 342 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 DCSTAMPQ9H295 470 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 SLC6A15Q9H2J7 730 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 OXSMQ9NWU1 459 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 PRORSD1PA6NEY8 169 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TOR1BO14657 336 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 LGR5O75473 907 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 PSKH1P11801 424 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 NCK1P16333 377 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 HTR1BP28222 390 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 DNAJA1P31689 397 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 ICAM3P32942 547 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 ASTE1Q2TB18 679 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 WSCD2Q2TBF2 565 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TMPRSS11BQ86T26 416 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 RANBP3LQ86VV4 465 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 SLC43A3Q8NBI5 491 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TSEN15Q8WW01 171 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 ZC3H10Q96K80 434 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 TBATAQ96M53 351 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 CAMK1GQ96NX5 476 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 PCDHGB7Q9Y5F8 929 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 CD72P21854 359 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 NDST2P52849 883 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 ATP13A5Q4VNC0 1218 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 FAM156AQ8NDB6 213 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 OR52J3Q8NH60 311 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 DNAJA4Q8WW22 397 aaPredicted RBP12.8□□□□□ -0.36
RNF43-201ENST00000407977 SPACA7Q96KW9 195 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 CLEC4AQ9UMR7 237 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TESMINQ9Y4I5 508 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 HES2Q9Y543 173 aa12.8□□□□□ -0.36
RNF43-201ENST00000407977 TBC1D3BA6NDS4 549 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 H3BM21 787 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 WNT7AO00755 349 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 CLPXO76031 633 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 OR4F21O95013 312 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 C8GP07360 202 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 GLUD2P49448 558 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ADAM8P78325 824 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 PDSS2Q86YH6 399 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ITPAQ9BY32 194 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 COMMD4Q9H0A8 199 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 C14orf105Q9NVL8 296 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ABCG2Q9UNQ0 655 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 HCN1O60741 890 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SCN2BO60939 215 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ELFN1P0C7U0 828 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SMIM10L2AP0DMW4 78 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SMIM10L2BP0DMW5 78 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 MAB21L1Q13394 359 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 EBF4Q9BQW3 602 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms