RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 PDLIM5Q96HC4 596 aaKnown RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 IPPKQ9H8X2 491 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PDE10AQ9Y233 779 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 RNF11Q9Y3C5 154 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 TICRRQ7Z2Z1 1910 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 IGLV3-16A0A075B6K0 115 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 TSPAN6O43657 245 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 ESRRBO95718 433 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 EPHX1P07099 455 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 SRPRAP08240 638 aaKnown RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 GNAZP19086 355 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 GPX3P22352 226 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PDHA2P29803 388 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PSMD8P48556 350 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 ABRQ12979 859 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 CEACAM7Q14002 265 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PTK2BQ14289 1009 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 DNAL1Q4LDG9 190 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PGM2L1Q6PCE3 622 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 MYLK4Q86YV6 388 aaPredicted RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 SUGP1Q8IWZ8 645 aaKnown RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 TERB1Q8NA31 727 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 ELMO1Q92556 727 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 ATP6V1E2Q96A05 226 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 RHBDF1Q96CC6 855 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 AP2M1Q96CW1 435 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 TTC1Q99614 292 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 P2RY13Q9BPV8 354 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 NUDT4Q9NZJ9 180 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 DPP7Q9UHL4 492 aa13.81□□□□□ -0.2
PRAME-205ENST00000405655 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
PRAME-205ENST00000405655 CROCCQ5TZA2 2017 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 GOLGA4Q13439 2230 aaKnown RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 TSPAN11A1L157 253 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 SOBPA7XYQ1 873 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 NR5A2O00482 541 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 SOD1P00441 154 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 CYP2A6P11509 494 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 XRCC1P18887 633 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 SOX11P35716 441 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 MS4A2Q01362 244 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 RUNX3Q13761 415 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 ABRAXAS2Q15018 415 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 HNRNPA1L2Q32P51 320 aaKnown RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 VPS26BQ4G0F5 336 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 ANKRD54Q6NXT1 300 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 Q6ZSR9 355 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 DPPA4Q7L190 304 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 ADAMTSL2Q86TH1 951 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 KYQ8NBH2 561 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 RP9Q8TA86 221 aaKnown RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 ATG10Q9H0Y0 220 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 CDH7Q9ULB5 785 aa13.8□□□□□ -0.2
PRAME-205ENST00000405655 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
PRAME-205ENST00000405655 WFS1O76024 890 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 RPSAP08865 295 aaKnown RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 EPORP19235 508 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 RGS4P49798 205 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 TRAF3Q13114 568 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 CRY1Q16526 586 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 IER5LQ5T953 404 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 REP15Q6BDI9 236 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 FBXL19Q6PCT2 694 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 UBE2R2Q712K3 238 aaPredicted RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 SFRP1Q8N474 314 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 PLA2G15Q8NCC3 412 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 METTL6Q8TCB7 284 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 KLK6Q92876 244 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 MRPL38Q96DV4 380 aaKnown RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 FAR2Q96K12 515 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 WDR41Q9HAD4 459 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 SERGEFQ9UGK8 458 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 SLC8A2Q9UPR5 921 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 POMPQ9Y244 141 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 OARD1Q9Y530 152 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 RAD51BO15315 384 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 RECQL5O94762 991 aaPredicted RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 KAT7O95251 611 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 ITPKAP23677 461 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 PTDSS1P48651 473 aaKnown RBP13.79□□□□□ -0.2
PRAME-205ENST00000405655 UFM1P61960 85 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 SATB1Q01826 763 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 LYPLAL1Q5VWZ2 237 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 IL27RAQ6UWB1 636 aa13.79□□□□□ -0.2
PRAME-205ENST00000405655 PLPP6Q8IY26 295 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms