RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 AGXTP21549 392 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 IDUAP35475 653 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 LEPRP48357 1165 aaKnown RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 CSNK2BP67870 215 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 PITX1P78337 314 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 SP2Q02086 613 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 MXD1Q05195 221 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 BTG3Q14201 252 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 GALNT3Q14435 633 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 NOMO2Q5JPE7 1267 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 DESI1Q6ICB0 168 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 ADAMTSL2Q86TH1 951 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 SYT12Q8IV01 421 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 TRIM48Q8IWZ4 208 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 LRRC17Q8N6Y2 441 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 GFM1Q96RP9 751 aaKnown RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF717Q9BY31 904 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-202ENST00000405010 ATP13A3Q9H7F0 1226 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 MINDY3Q9H8M7 445 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 GOLGA2P5Q9HBQ8 144 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 C14orf119Q9NWQ9 140 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 FBXW11Q9UKB1 542 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 GSTK1Q9Y2Q3 226 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 TMEM98Q9Y2Y6 226 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 DNAJC15Q9Y5T4 150 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 LRP5O75197 1615 aa7.3□□□□□ -1.24
HDAC9-202ENST00000405010 SLC28A1O00337 649 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ACOX3O15254 700 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MSI1O43347 362 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 UPK1BO75841 260 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 FABP3P05413 133 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ODC1P11926 461 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 COX7A2P14406 83 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ARSAP15289 507 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GGT5P36269 586 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PPP3CCP48454 512 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 NUDT6P53370 316 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 RAB25P57735 213 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SRP54P61011 504 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GRIK4Q16099 956 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 HIST2H2ACQ16777 129 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MAMDC4Q6UXC1 1216 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ITIH5Q86UX2 942 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 TICAM1Q8IUC6 712 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 C2CD4AQ8NCU7 369 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SLC38A4Q969I6 547 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 RNFT2Q96EX2 444 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 FAM126AQ9BYI3 521 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SLC25A51Q9H1U9 297 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 TAS2R9Q9NYW1 312 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GALPQ9UBC7 116 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MAPRE3Q9UPY8 281 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MAGED1Q9Y5V3 778 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ADAMTS7Q9UKP4 1686 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 GNG14A0A1W2PPG7 69 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 FAM220BPB1ANY3 271 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SUV39H1O43463 412 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 HCRTO43612 131 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PAGE1O75459 146 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PSIP1O75475 530 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 WBP4O75554 376 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 RGS20O76081 388 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 LGALS2P05162 132 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 XPAP23025 273 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SHMT2P34897 504 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CLK3P49761 638 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 DSC2Q02487 901 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 UNC50Q53HI1 259 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 RETREG3Q86VR2 466 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 LSMEM2Q8N112 164 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MYLPFQ96A32 169 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 NSUN5Q96P11 429 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SLC30A2Q9BRI3 323 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CNPPD1Q9BV87 410 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 BEX2Q9BXY8 128 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SLC22A4Q9H015 551 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MUC3BQ9H195 1237 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CRISPLD1Q9H336 500 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 AGO3Q9H9G7 860 aaKnown RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 LRTM1Q9HBL6 345 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 NMRK2Q9NPI5 230 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 PDLIM7Q9NR12 457 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SNTG1Q9NSN8 517 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF224Q9NZL3 707 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF624Q9P2J8 865 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF222Q9UK12 451 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 UBR2Q8IWV8 1755 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 CASTOR2A6NHX0 329 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 A6NL46 340 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 SULT1C4O75897 302 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 DIRAS1O95057 198 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 FGF1P05230 155 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 MYCLP1P12525 358 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-202ENST00000405010 BMP4P12644 408 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 EPB42P16452 691 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 HTR1BP28222 390 aa7.29□□□□□ -1.24
HDAC9-202ENST00000405010 RABGGTBP53611 331 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms