RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 USP24Q9UPU5 2620 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 WDFY3Q8IZQ1 3526 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 IGHV5-10-1A0A0J9YXX1 117 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 F8W8V4 182 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 TAF4O00268 1085 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 PRMT5O14744 637 aaPredicted RBP18.77■□□□□ 0.6
RTN4-207ENST00000402434 LIN7AO14910 233 aaPredicted RBP18.77■□□□□ 0.6
RTN4-207ENST00000402434 TP73O15350 636 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 SLC35G4P0C7Q5 338 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 CD151P48509 253 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 GABREP78334 506 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 MRNIPQ6NTE8 343 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 HIBCHQ6NVY1 386 aaPredicted RBP18.77■□□□□ 0.6
RTN4-207ENST00000402434 PROSER1Q86XN7 944 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 LSMEM2Q8N112 164 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 TMEM159Q96B96 161 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 RMDN2Q96LZ7 410 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 TCF12Q99081 682 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 EPB41L5Q9HCM4 733 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 OGFRQ9NZT2 677 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 RPS6KL1Q9Y6S9 549 aa18.77■□□□□ 0.6
RTN4-207ENST00000402434 URB1O60287 2271 aaKnown RBP18.77■□□□□ 0.6
RTN4-207ENST00000402434 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 BRINP1O60477 761 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 USP1O94782 785 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 SEC31AO94979 1220 aaKnown RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 PDHA2P29803 388 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 TRA2AQ13595 282 aaKnown RBP eCLIP18.77■□□□□ 0.593e-8■■■□□ 18.5
RTN4-207ENST00000402434 TYSND1Q2T9J0 566 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 C3orf38Q5JPI3 329 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 NEPROQ6NW34 567 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 RAB11FIP2Q7L804 512 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 SDCCAG8Q86SQ7 713 aaPredicted RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 ZNF669Q96BR6 464 aaPredicted RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 SNF8Q96H20 258 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 C12orf66Q96MD2 445 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 SLC46A1Q96NT5 459 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 CARD6Q9BX69 1037 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 P2RY12Q9H244 342 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 IMP3Q9NV31 184 aaKnown RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 TMEM9Q9P0T7 183 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 CFAP20Q9Y6A4 193 aaKnown RBP18.77■□□□□ 0.59
RTN4-207ENST00000402434 MAD1L1Q9Y6D9 718 aa18.77■□□□□ 0.59
RTN4-207ENST00000402434 SLC5A10A0PJK1 596 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 FAM187AA6NFU0 413 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 GOLGA8KD6RF30 607 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 GOLGA8TH3BQL2 631 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 PLD2O14939 933 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 NDUFS3O75489 264 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 UBXN7O94888 489 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 THRAP10827 490 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 RPS3P23396 243 aaKnown RBP eCLIP18.76■□□□□ 0.593e-16■■□□□ 11.6
RTN4-207ENST00000402434 PLOD1Q02809 727 aaPredicted RBP18.76■□□□□ 0.59
RTN4-207ENST00000402434 MSS51Q4VC12 460 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 PHF19Q5T6S3 580 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 ZNF449Q6P9G9 518 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 MAATS1Q7Z4T9 603 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 LRRC6Q86X45 466 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 NCSTNQ92542 709 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 STAMBPL1Q96FJ0 436 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 CDC23Q9UJX2 597 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 ZMIZ1Q9ULJ6 1067 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 HEBP2Q9Y5Z4 205 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 FAM169AQ9Y6X4 670 aa18.76■□□□□ 0.59
RTN4-207ENST00000402434 PMS2P1A4D2B8 440 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 EFCAB8A8MWE9 144 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 HGSO14964 777 aaPredicted RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 TUBB4AP04350 444 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 OGNP20774 298 aaKnown RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 MLLT3P42568 568 aaPredicted RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 PREPP48147 710 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 ITGA8P53708 1063 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 ADARP55265 1226 aaKnown RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 ST3GAL2Q16842 350 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 DNAJC21Q5F1R6 531 aaKnown RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 RNF187Q5TA31 235 aaPredicted RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 CILP2Q8IUL8 1156 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 PDIK1LQ8N165 341 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 ELMO1Q92556 727 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 CCDC74BQ96LY2 380 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 CMKLR1Q99788 373 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 EBNA1BP2Q99848 306 aaKnown RBP18.75■□□□□ 0.59
RTN4-207ENST00000402434 NAT9Q9BTE0 207 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 KIR3DX1Q9H7L2 352 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 ASCL3Q9NQ33 180 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 COLEC10Q9Y6Z7 277 aa18.75■□□□□ 0.59
RTN4-207ENST00000402434 IFRD1O00458 451 aaPredicted RBP18.74■□□□□ 0.59
RTN4-207ENST00000402434 PFDN6O15212 129 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 PGAM1P18669 254 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 NDUFS1P28331 727 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 CCR7P32248 378 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 MAPK9P45984 424 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 RPL21P46778 160 aaKnown RBP18.74■□□□□ 0.59
RTN4-207ENST00000402434 ERVPABLB-1P60509 514 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 DHX9Q08211 1270 aaKnown RBP18.74■□□□□ 0.59
RTN4-207ENST00000402434 C2orf54Q08AI8 447 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 C16orf72Q14CZ0 275 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 LONRF1Q17RB8 773 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 DUS1LQ6P1R4 473 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms