RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NDNQ99608 321 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SLC46A2Q9BY10 475 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CIPCQ9C0C6 399 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 EIF3LQ9Y262 564 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 HSPE1-MOB4S4R3N1 261 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 OTOGLQ3ZCN5 2332 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TBX10O75333 385 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MC4RP32245 332 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 GRIA2P42262 883 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PSME3P61289 254 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CSNK2BP67870 215 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TRAF3Q13114 568 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CSHL1Q14406 222 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 LRIF1Q5T3J3 769 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PRAMEF8Q5VWM4 474 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PRAMEF7Q5VXH5 474 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TECPR1Q7Z6L1 1165 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PGLYRP2Q96PD5 576 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 APOL2Q9BQE5 337 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 OSBPL11Q9BXB4 747 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CACYBPQ9HB71 228 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MLXIPLQ9NP71 852 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ARL8BQ9NVJ2 186 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ASXL3Q9C0F0 2248 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 C1orf232A0A0U1RR37 186 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PRSS51A0A1B0GVH4 220 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MAP3K7O43318 606 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SNAP91O60641 907 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MAP3K6O95382 1288 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 HPRP00739 348 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ITKQ08881 620 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 UBAP2Q5T6F2 1119 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TTC19Q6DKK2 380 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PAQR3Q6TCH7 311 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MARVELD2Q8N4S9 558 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TWSG1Q9GZX9 223 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MAGIXQ9H6Y5 334 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SYNDIG1Q9H7V2 258 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 INTS6Q9UL03 887 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATP11BQ9Y2G3 1177 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PLXNA2O75051 1894 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TRIM64A6NGJ6 449 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ECI2O75521 394 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CBX6O95503 412 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MAPK10P53779 464 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 OVGP1Q12889 678 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CUL3Q13618 768 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TEAD4Q15561 434 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 DLG2Q15700 870 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 C1orf146Q5VVC0 180 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CNSTQ6PJW8 725 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PRSS55Q6UWB4 352 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ZC3H7AQ8IWR0 971 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 GJD3Q8N144 294 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 KLHL23Q8NBE8 558 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 NDRG1Q92597 394 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM159Q96B96 161 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 HAUS8Q9BT25 410 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ZBED2Q9BTP6 218 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATXN3LQ9H3M9 355 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATAD3AQ9NVI7 634 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM9Q9P0T7 183 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CD300AQ9UGN4 299 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RNF112Q9ULX5 631 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CACNA1CQ13936 2221 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MUSKO15146 869 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ZBTB14O43829 449 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TBL1XO60907 577 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 RNASEH1O60930 286 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PABPC4LP0CB38 370 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TRIM23P36406 574 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CHRNA4P43681 627 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TBL3Q12788 808 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 IL18R1Q13478 541 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 DUSP6Q16828 381 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 KCTD21Q4G0X4 260 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 HENMT1Q5T8I9 393 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 LRRC74BQ6ZQY2 392 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ZFAND4Q86XD8 727 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TRAPPC9Q96Q05 1148 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CENPKQ9BS16 269 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 BBS2Q9BXC9 721 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GORASP2Q9H8Y8 452 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PCDHB3Q9Y5E6 796 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TRBV5-3A0A0A0MS03 114 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 WNT9AO14904 365 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SLC22A3O75751 556 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GUSBP08236 651 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 HLA-FP30511 346 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SPIN4Q56A73 249 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 OGFRL1Q5TC84 451 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PROSER1Q86XN7 944 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CEP97Q8IW35 865 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MFSD6LQ8IWD5 586 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PIANPQ8IYJ0 282 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SLC22A15Q8IZD6 547 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 OR8J2Q8NGG1 315 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 METTL6Q8TCB7 284 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GLYATL1Q969I3 302 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms