RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CMC1Q7Z7K0 106 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 AMIGO2Q86SJ2 522 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CUZD1Q86UP6 607 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DENND6BQ8NEG7 585 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RFT1Q96AA3 541 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ZBED6CLQ96FA7 236 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 ACBD6Q9BR61 282 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TDRD1Q9BXT4 1180 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 METTL7AQ9H8H3 244 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PCDHGB1Q9Y5G3 927 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 WNT9AO14904 365 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RLN2P04090 185 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LINGO3P0C6S8 592 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 THRBP10828 461 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RBMS1P29558 406 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 DSC2Q02487 901 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CRHR2Q13324 411 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ALG10BQ5I7T1 473 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LDLRAP1Q5SW96 308 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 KCNK18Q7Z418 384 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PARP8Q8N3A8 854 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DCBLD1Q8N8Z6 715 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LMX1AQ8TE12 382 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RFKQ969G6 155 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RCN3Q96D15 328 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 SLC47A1Q96FL8 570 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 IFT27Q9BW83 186 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PTGES2Q9H7Z7 377 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 BRF2Q9HAW0 419 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 FBXL12Q9NXK8 326 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 BAZ2BQ9UIF8 2168 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 CTTNBP2Q8WZ74 1663 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DUXAA6NLW8 204 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 INSIG1O15503 277 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PDPK1O15530 556 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 AP5Z1O43299 807 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TULP3O75386 442 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 FADS2O95864 444 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 ITGB5P18084 799 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PSMA1P25786 263 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 PBX3P40426 434 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CCNFP41002 786 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CLCNKBP51801 687 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RTP1P59025 263 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 NOMO3P69849 1222 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RAB39AQ14964 217 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CRY2Q49AN0 593 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 C4orf46Q504U0 113 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 AAGABQ6PD74 315 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 SERPINA9Q86WD7 417 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PHF13Q86YI8 300 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ZNF527Q8NB42 609 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DNAJA4Q8WW22 397 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 PNPLA2Q96AD5 504 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 SLC35G5Q96KT7 338 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CCDC115Q96NT0 180 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 HAPLN3Q96S86 360 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LRMDAQ9H2I8 198 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 SMURF1Q9HCE7 757 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ABCB9Q9NP78 766 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ZCCHC3Q9NUD5 404 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 DNAAF2Q9NVR5 837 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 GDAP2Q9NXN4 497 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ATXN10Q9UBB4 475 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RAPGEFL1Q9UHV5 662 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 A0A0G2JN53 185 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TFECO14948 347 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 NME6O75414 186 aaPredicted RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 C2P06681 752 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 SEPHS1P49903 392 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 AKR1D1P51857 326 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 FOXK1P85037 733 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 IL18R1Q13478 541 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PERM1Q5SV97 790 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 IL23RQ5VWK5 629 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CTU1Q7Z7A3 348 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 SAMD9LQ8IVG5 1584 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 OXR1Q8N573 874 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ZNF615Q8N8J6 731 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DNAAF1Q8NEP3 725 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DCAKDQ8WVC6 231 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 S100ZQ8WXG8 99 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 MR1Q95460 341 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PLD4Q96BZ4 506 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 MFSD3Q96ES6 412 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DGAT2Q96PD7 388 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CSPG4P5Q96PW8 444 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 TRMT13Q9NUP7 481 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 HECW2Q9P2P5 1572 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 PCDHA2Q9Y5H9 948 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 CIB4A0PJX0 185 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 E7EQ34 232 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TNFRSF11BO00300 401 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms