RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 OR10G6Q8NH81 332 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 IMP4Q96G21 291 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 PLEKHG4BQ96PX9 1271 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 FSD1LQ9BXM9 530 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ASPSCR1Q9BZE9 553 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 FAM83DQ9H4H8 585 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 XAB2Q9HCS7 855 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 SARS2Q9NP81 518 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 OGFRQ9NZT2 677 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 VPS18Q9P253 973 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 FAM153AQ9UHL3 310 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 LRRK2Q5S007 2527 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 GOLGA8MH3BSY2 632 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 AURKAO14965 403 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 TP73O15350 636 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ZW10O43264 779 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 GRID2O43424 1007 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 NUAK1O60285 661 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 PPFIA2O75334 1257 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 SUN1O94901 812 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 PRKAR1AP10644 381 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 F3P13726 295 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 H2AFXP16104 143 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 CA4P22748 312 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 F8A1P23610 371 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 OAS2P29728 719 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 UBE2IP63279 158 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 KCNAB2Q13303 367 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 PEX6Q13608 980 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 SLC14A2Q15849 920 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 PLA2G4EQ3MJ16 856 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 KHDC1Q4VXA5 237 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 DNAJC21Q5F1R6 531 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ANKRD22Q5VYY1 191 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ALS2CLQ60I27 953 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 SPATA22Q8NHS9 363 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 AENQ8WTP8 325 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 CAVIN3Q969G5 261 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 TRIB3Q96RU7 358 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 MLPHQ9BV36 600 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 PHACTR1Q9C0D0 580 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 EPN3Q9H201 632 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 OR2AG1Q9H205 316 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF71Q9NQZ8 489 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 KLC4Q9NSK0 619 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 SIDT1Q9NXL6 827 aaKnown RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 UBP1Q9NZI7 540 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF624Q9P2J8 865 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-202ENST00000396828 CPNE7Q9UBL6 633 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 TMPRSS11EQ9UL52 423 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 SLC30A1Q9Y6M5 507 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 DOPEY2Q9Y3R5 2298 aa10.16□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF106Q9H2Y7 1883 aaKnown RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 TCRBV7S3A2A0A539 114 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 PRR19A6NJB7 356 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 K7EM74 188 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 EIF3HO15372 352 aaKnown RBP eCLIP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 MTX2O75431 263 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 PMPCBO75439 489 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 STK17BO94768 372 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 TMEM63AO94886 807 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SLC4A1P02730 911 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 PYGLP06737 847 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 FAM153BP0C7A2 387 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 MLNP12872 115 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 TYRP1P17643 537 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SLC19A1P41440 591 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 RAB15P59190 212 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 RPL26P61254 145 aaKnown RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SH3BP2P78314 561 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 IGFBP7Q16270 282 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 PCSK7Q16549 785 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 FAM153CQ494X1 144 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 KCTD11Q693B1 232 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 LRRC8BQ6P9F7 803 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 FBXO38Q6PIJ6 1188 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 CRTC3Q6UUV7 619 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 ADGRG6Q86SQ4 1221 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF547Q8IVP9 402 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 NLGN4XQ8N0W4 816 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 DNAAF3Q8N9W5 541 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 IPMKQ8NFU5 416 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 NLGN4YQ8NFZ3 816 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 ANKRD7Q92527 254 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 OXNAD1Q96HP4 312 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SLC45A3Q96JT2 553 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SERPINB12Q96P63 405 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 DPYSL5Q9BPU6 564 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 TBL1YQ9BQ87 522 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 FBXO8Q9NRD0 319 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 PKD2L2Q9NZM6 624 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 RPL26L1Q9UNX3 145 aaKnown RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 TMEM184BQ9Y519 407 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-202ENST00000396828 SPO11Q9Y5K1 396 aa10.15□□□□□ -0.78
NEDD8-202ENST00000396828 USP9XQ93008 2570 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms