RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 HDAC10Q969S8 669 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 C9orf72Q96LT7 481 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 CCNL2Q96S94 520 aaPredicted RBP18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 EFHD1Q9BUP0 239 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 KIR3DX1Q9H7L2 352 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 XAB2Q9HCS7 855 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 IMP3Q9NV31 184 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 SCHIP1Q9P0W5 487 aaPredicted RBP18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 SAMD15Q9P1V8 674 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 SNX12Q9UMY4 172 aa18.9■□□□□ 0.62
CDKN1B-202ENST00000396340 CAPN5O15484 640 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 GPR39O43194 453 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 PBLDP30039 288 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 MC2RQ01718 297 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 RNF187Q5TA31 235 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 CAPRIN2Q6IMN6 1127 aaKnown RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 MRNIPQ6NTE8 343 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 PRSS42Q7Z5A4 293 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 PCGF5Q86SE9 256 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 SDCCAG8Q86SQ7 713 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 PDZD3Q86UT5 571 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 ACVR1CQ8NER5 493 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 OR13J1Q8NGT2 312 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 PANX3Q96QZ0 392 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 TCF12Q99081 682 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 TBC1D10AQ9BXI6 508 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 ZNF768Q9H5H4 540 aaKnown RBP18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 RNF14Q9UBS8 474 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 POLG2Q9UHN1 485 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 WDR37Q9Y2I8 494 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 CHD6Q8TD26 2715 aa18.89■□□□□ 0.61
CDKN1B-202ENST00000396340 EFCAB7A8K855 629 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 NDC80O14777 642 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 POLR1CO15160 346 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 RASSF9O75901 435 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 KRT14P02533 472 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 RPN2P04844 631 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 FGF3P11487 239 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 ITIH1P19827 911 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 FOXN2P32314 431 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 COILP38432 576 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 RHDQ02161 417 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 CFHR1Q03591 330 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 VAC14Q08AM6 782 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 GPS1Q13098 491 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 DBN1Q16643 649 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 C19orf48Q6RUI8 117 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 CCDC81Q6ZN84 652 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 ZNF761Q86XN6 746 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 FCRL3Q96P31 734 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 FCRL4Q96PJ5 515 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 UBL7Q96S82 380 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 WWP1Q9H0M0 922 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 PRORYQ9H606 182 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 COG4Q9H9E3 785 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 CATSPERZQ9NTU4 200 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 PSMD13Q9UNM6 376 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 AHCTF1Q8WYP5 2266 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 PTPRQQ9UMZ3 2332 aa18.88■□□□□ 0.61
CDKN1B-202ENST00000396340 PRAMEF33A0A0G2JMD5 474 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 CCDC162PA2VCL2 907 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 TK2O00142 265 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 SMAPO00193 183 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 SGTAO43765 313 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 PRAMEF10O60809 474 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 PHF2O75151 1096 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 GOT2P00505 430 aaKnown RBP18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 HGFP14210 728 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 ETS1P14921 441 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 KCNJ1P48048 391 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 SYTL3Q4VX76 610 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 CCDC38Q502W7 563 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 XKR5Q6UX68 686 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 LMNTD2Q8IXW0 634 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 MCUQ8NE86 351 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 GSDMBQ8TAX9 411 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 ASZ1Q8WWH4 475 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 ART4Q93070 314 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 KIFC1Q9BW19 673 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 FAM96AQ9H5X1 160 aa18.87■□□□□ 0.61
CDKN1B-202ENST00000396340 TLCD2A6NGC4 264 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 H3BMM5 538 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 ZSCAN5DPP0CG00 497 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 TYRP1P17643 537 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 ARL4DP49703 201 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SESN2P58004 480 aaPredicted RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 TMED2Q15363 201 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SNAP47Q5SQN1 464 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 MANEAQ5SRI9 462 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 TMTC4Q5T4D3 741 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 FAM83HQ6ZRV2 1179 aaPredicted RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SYDE1Q6ZW31 735 aaPredicted RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 DTX1Q86Y01 620 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 PIANPQ8IYJ0 282 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 GLIS1Q8NBF1 620 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 OR8K5Q8NH50 307 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 WBP1Q96G27 269 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms