RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 UGT2B11O75310 529 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 EEDO75530 441 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 STK16O75716 305 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GSNP06396 782 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 G6PDP11413 515 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SERPINA4P29622 427 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 MAPK8P45983 427 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 IRF8Q02556 426 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 LRRC74AQ0VAA2 488 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 PLD1Q13393 1074 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SIM2Q14190 667 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 LINGO4Q6UY18 593 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 CHST15Q7LFX5 561 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SYVN1Q86TM6 617 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ELMOD1Q8N336 334 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 STARD8Q92502 1023 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 PLEKHA8Q96JA3 519 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GPR78Q96P69 363 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 C6orf62Q9GZU0 229 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNFX1Q9P2E3 1918 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 TBKBP1A7MCY6 615 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 TBL1XO60907 577 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 PRAMEF1O95521 474 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 CORO1AP31146 461 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SOAT1P35610 550 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 RPS24P62847 133 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SREBF2Q12772 1141 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 CBX3Q13185 183 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 MOGQ16653 247 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GALNT5Q7Z7M9 940 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 CCDC103Q8IW40 242 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SCML4Q8N228 414 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 TTC30BQ8N4P2 665 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 OR5K1Q8NHB7 308 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 UTP15Q8TED0 518 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 UBXN10Q96LJ8 280 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 PANX1Q96RD7 426 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 EMILIN2Q9BXX0 1053 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ZFYVE1Q9HBF4 777 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SH3BP4Q9P0V3 963 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ABCB7O75027 752 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 LRATO95237 230 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 CYP11A1P05108 521 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ASGR1P07306 291 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ARSAP15289 507 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 HOXD10P28358 340 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SOX6P35712 828 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GJA5P36382 358 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 HLCSP50747 726 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 EMX2Q04743 252 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 RUNX1T1Q06455 604 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 SKIV2LQ15477 1246 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 LRRTM3Q86VH5 581 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ADGRG5Q8IZF4 528 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 OR13J1Q8NGT2 312 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ZHX1-C8orf76Q96EF9 292 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF382Q96SR6 550 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 GPATCH1Q9BRR8 931 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ROGDIQ9GZN7 287 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 INTS7Q9NVH2 962 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF623O75123 536 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ALDOCP09972 364 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 MZF1P28698 734 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RXRGP48443 463 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM32Q13049 653 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TUBA3CQ13748 450 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TGFBIQ15582 683 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 SERPINA9Q86WD7 417 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ZBTB2Q8N680 514 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TMEM169Q96HH4 297 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 REXO5Q96IC2 774 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 MRPL9Q9BYD2 267 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RPF2Q9H7B2 306 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 AGPAT4Q9NRZ5 378 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 KRT84Q9NSB2 600 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ARID2Q68CP9 1835 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 NDUFS2O75306 463 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ATP6V1G1O75348 118 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 HSMCR30P0CW71 290 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 FOXA1P55317 472 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 APOFQ13790 326 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 SCD5Q86SK9 330 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM69Q86WT6 500 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 OR4F6Q8NGB9 312 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 OR6K2Q8NGY2 324 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 MRPS31Q92665 395 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TUBA1CQ9BQE3 449 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 C1orf109Q9NX04 203 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 J3QRK9 145 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF701M0R085 212 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 PRKD3O94806 890 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms