RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ITIH5Q86UX2 942 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ZCCHC7Q8N3Z6 543 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SVOPQ8N4V2 548 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 TMCO5AQ8N6Q1 288 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 HASPINQ8TF76 798 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SOCS4Q8WXH5 440 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 PPM1MQ96MI6 270 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NODALQ96S42 347 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 LHPPQ9H008 270 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ACTR8Q9H981 624 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 CCNB1IP1Q9NPC3 277 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NECTIN3Q9NQS3 549 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SCN3BQ9NY72 215 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ADGRE2Q9UHX3 823 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 PADI3Q9ULW8 664 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ERVW-1Q9UQF0 538 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 TPRKBQ9Y3C4 175 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NAALAD2Q9Y3Q0 740 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 OR6C75A6NL08 312 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 FAM220BPB1ANY3 271 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 K7EPI3 171 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 LSM1O15116 133 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 E2F6O75461 281 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 RSL1D1O76021 490 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 FKBP9O95302 570 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 CHRNA1P02708 482 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 CAPN1P07384 714 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 ITGAMP11215 1152 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 IL12AP29459 219 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 MC4RP32245 332 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 SHMT2P34897 504 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 YAP1P46937 504 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 PLA2G16P53816 162 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 CDH4P55283 916 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 PPP2R2BQ00005 443 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 GNA12Q03113 381 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 MVKQ03426 396 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 GTF2H2Q13888 395 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 DSC3Q14574 896 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 IHHQ14623 411 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 DGUOKQ16854 277 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 SETMARQ53H47 684 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 IL31Q6EBC2 164 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 GTF2H2CQ6P1K8 395 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 TTC23LQ6PF05 361 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 TBPL2Q6SJ96 375 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 GLB1LQ6UWU2 654 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 Q6ZSR9 355 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 SLC15A4Q8N697 577 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 CHDHQ8NE62 594 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 BPIFB6Q8NFQ5 453 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 CD200R1Q8TD46 325 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 FIG4Q92562 907 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 TBC1D20Q96BZ9 403 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 VMP1Q96GC9 406 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 NSMCE3Q96MG7 304 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 THUMPD3Q9BV44 507 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 DPY30Q9C005 99 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 RMND5AQ9H871 391 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 SELENONQ9NZV5 590 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 ANGPTL3Q9Y5C1 460 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 V9GYQ6 96 aa9.89□□□□□ -0.83
UBE2D3-208ENST00000394803 LOC100130705A0A1B0GUX0 176 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 TMEM221A6NGB7 291 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ZNF99A8MXY4 864 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 SLC16A6O15403 523 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 KDELR3O43731 214 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ERN1O75460 977 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 TSPAN12O95859 305 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 G6PDP11413 515 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ACVRL1P37023 503 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 SLC11A2P49281 568 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 AGTR2P50052 363 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 HNRNPFP52597 415 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 MTPNP58546 118 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ERVPABLB-1P60509 514 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 CXCR4P61073 352 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ANKDD1AQ495B1 522 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ZRANB3Q5FWF4 1079 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 LRRC8DQ7L1W4 858 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 MILR1Q7Z6M3 343 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 RALGPS2Q86X27 583 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 MIB1Q86YT6 1006 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 MICU2Q8IYU8 434 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ELMOD1Q8N336 334 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ZNF548Q8NEK5 533 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 SH3RF2Q8TEC5 729 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 SPATA17Q96L03 361 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 C19orf43Q9BQ61 176 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 NAA50Q9GZZ1 169 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 ZNF225Q9UK10 706 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 INVSQ9Y283 1065 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 MED16Q9Y2X0 877 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 POLR3HQ9Y535 204 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 H0Y858 1186 aa9.88□□□□□ -0.83
UBE2D3-208ENST00000394803 M0QX08 132 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms