RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SIPA1Q96FS4 1042 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 HIC2Q96JB3 615 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 LENG8Q96PV6 779 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 OR52B2Q96RD2 323 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CDX2Q99626 313 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CCM2Q9BSQ5 444 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TRIM54Q9BYV2 358 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 OSBPL6Q9BZF3 934 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 FBRSQ9HAH7 460 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TNFRSF12AQ9NP84 129 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TCF7L2Q9NQB0 619 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 SAR1AQ9NR31 198 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 WWOXQ9NZC7 414 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 NDRG2Q9UN36 371 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 G3BP2Q9UN86 482 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 COL4A2P08572 1712 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3DA0A087WVF3 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3IA0A087WXS9 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3EA0A087X179 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3KA0A087X1G2 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3FA6NER0 549 aaPredicted RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 TMEM202A6NGA9 273 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3LB9A6J9 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 H0YHG0 523 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 EIF3FO00303 357 aaPredicted RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 GIPC1O14908 333 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 NUAK1O60285 661 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 JUNP05412 331 aaKnown RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 RPS17P08708 135 aaKnown RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 HIST1H2AGP0C0S8 130 aaPredicted RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3HP0C7X1 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 MPC1LP0DKB6 136 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 HIST1H2ADP20671 130 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 PREPP48147 710 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 PRLHRP49683 370 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 NCALDP61601 193 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 SH3BP2P78314 561 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ABRQ12979 859 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 LCP2Q13094 533 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 PPP1R3AQ16821 1122 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 SLC44A4Q53GD3 710 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 SPDYAQ5MJ70 313 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3GQ6DHY5 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3CQ6IPX1 549 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 PNCKQ6P2M8 343 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 KIAA1324Q6UXG2 1013 aaKnown RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 ADGRG6Q86SQ4 1221 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 NLRP8Q86W28 1048 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TBC1D3Q8IZP1 549 aaPredicted RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 KIRREL3Q8IZU9 778 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 CLYBLQ8N0X4 340 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 OR56A4Q8NGH8 313 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ZNF483Q8TF39 744 aaPredicted RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 DLG3Q92796 817 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ATP6V1E2Q96A05 226 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 NSL1Q96IY1 281 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 HIST1H2AHQ96KK5 128 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 HIST1H2AJQ99878 128 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 H2AFJQ9BTM1 129 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TUBB6Q9BUF5 446 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TRIM39Q9HCM9 518 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ARL8BQ9NVJ2 186 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ATXN10Q9UBB4 475 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 PCTPQ9UKL6 214 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TRIM33Q9UPN9 1127 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 NCKAP1Q9Y2A7 1128 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TMEM98Q9Y2Y6 226 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 ANGPTL3Q9Y5C1 460 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 TNPO3Q9Y5L0 923 aaKnown RBP8.48□□□□□ -1.05
TDP1-203ENST00000393454 CAPN7Q9Y6W3 813 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 EYSQ5T1H1 3165 aa8.48□□□□□ -1.05
TDP1-203ENST00000393454 AZIN1O14977 448 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 CCNT2O60583 730 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 RNGTTO60942 597 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 UNC5CO95185 931 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 MLYCDO95822 493 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PAK4O96013 591 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 ENO1P06733 434 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 C8GP07360 202 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ESRRAP11474 423 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 GLULP15104 373 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 HSPA7P48741 367 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 RPIAP49247 311 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 NAA20P61599 178 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 RPS21P63220 83 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 BTKQ06187 659 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 TDGQ13569 410 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 KRT72Q14CN4 511 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SMAD2Q15796 467 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 WSCD2Q2TBF2 565 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 LSM12Q3MHD2 195 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 EOGTQ5NDL2 527 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 FAM219BQ5XKK7 198 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SULT1C3Q6IMI6 304 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PTCRAQ6ISU1 281 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 MBOAT1Q6ZNC8 495 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 HEATR4Q86WZ0 1026 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 CFAP206Q8IYR0 622 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PDPRQ8NCN5 879 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms