RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PRPH2P23942 346 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 AGTR2P50052 363 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SLC37A1P57057 533 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 NKPD1Q17RQ9 610 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 KRT71Q3SY84 523 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 AMZ2Q86W34 360 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 AMIGO1Q86WK6 493 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MYOCDQ8IZQ8 938 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ELP5Q8TE02 316 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 OIT3Q8WWZ8 545 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TRAF4Q9BUZ4 470 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 CCSER1Q9C0I3 900 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM107BQ9H098 131 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TMEM165Q9HC07 324 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TREM1Q9NP99 234 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM212BQ9NTI7 297 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 KCNN3Q9UGI6 736 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TOPBP1Q92547 1522 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 KANK1Q14678 1352 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GOLGA6L9A6NEM1 432 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 F8W735 103 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 LRRTM2O43300 516 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ATP5HO75947 161 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ZFYP08048 801 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 TSPAN8P19075 237 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 NMBRP28336 390 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 EPHB2P29323 1055 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GUCY1A2P33402 732 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RABGGTBP53611 331 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SOX10P56693 466 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MC2RQ01718 297 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 BAATQ14032 418 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 GAMTQ14353 236 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MAPK6Q16659 721 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CBWD6Q4V339 395 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 C19orf54Q5BKX5 351 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CBWD3Q5JTY5 395 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TREML2Q5T2D2 321 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TSTD2Q5T7W7 516 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PODNL1Q6PEZ8 512 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SLCO6A1Q86UG4 719 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PLD3Q8IV08 490 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM126BQ8IXS8 530 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GJC3Q8NFK1 279 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 OR8K3Q8NH51 312 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PPP4R1Q8TF05 950 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 IRF7Q92985 503 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GAL3ST1Q99999 423 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MESP1Q9BRJ9 268 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TUBGCP2Q9BSJ2 902 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 XYLT2Q9H1B5 865 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 BLZF1Q9H2G9 400 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CCNB1IP1Q9NPC3 277 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 C1GALT1Q9NS00 363 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SIRT5Q9NXA8 310 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 IL20RAQ9UHF4 553 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GRID1Q9ULK0 1009 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ATP6V1DQ9Y5K8 247 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 BZW2Q9Y6E2 419 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 TRBV2A0A0J9YWF9 115 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM90A7PA6NKC0 464 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM90A22PA8MWA6 464 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM90A12PA8MX19 464 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MAGEB17A8MXT2 336 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FAM90A23PA8MXZ1 464 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ITGBL1O95965 494 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 LCATP04180 440 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CYP1A2P05177 515 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ENGP17813 658 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CLCN7P51798 805 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 INHBEP58166 350 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TGFB2P61812 414 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RAE1P78406 368 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 MRPS15P82914 257 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 CHRNEQ04844 493 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 DUSP8Q13202 625 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 STIM1Q13586 685 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ANXA2RQ3ZCQ2 193 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RABGAP1LQ5R372 815 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SCARA5Q6ZMJ2 495 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CLNKQ7Z7G1 428 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 DSELQ8IZU8 1212 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ZCCHC7Q8N3Z6 543 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 TMEM104Q8NE00 496 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 IP6K1Q92551 441 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TECTBQ96PL2 329 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 COL25A1Q9BXS0 654 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 ASAH2Q9NR71 780 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MTMR4Q9NYA4 1195 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TFCP2L1Q9NZI6 479 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RIMKLBQ9ULI2 386 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PACSIN2Q9UNF0 486 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 AP4B1Q9Y6B7 739 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TONSLQ96HA7 1378 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 A0A1W2PPM1 405 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ESYT2A0FGR8 921 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 E9PLN8 166 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 NRG2O14511 850 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 DCLK1O15075 740 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms