RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ALG11Q2TAA5 492 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 TNFAIP8L3Q5GJ75 292 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 KIAA1324Q6UXG2 1013 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 BEND5Q7L4P6 421 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 NAT16Q8N8M0 369 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 EXOSC8Q96B26 276 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 OR52B2Q96RD2 323 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 MYOCQ99972 504 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 H3BNH8 94 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 STBD1O95210 358 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 PGLSO95336 258 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 PCDH1Q08174 1060 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 DAG1Q14118 895 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 OR10G6Q8NH81 332 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.34
LCA5-202ENST00000392959 GPATCH1Q9BRR8 931 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 BCL2L14Q9BZR8 327 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 INTS10Q9NVR2 710 aaKnown RBP12.96□□□□□ -0.34
LCA5-202ENST00000392959 CNTN3Q9P232 1028 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 MAP10Q9P2G4 905 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 PCDHGB3Q9Y5G1 929 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 FAM159BA6NKW6 160 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 OR2AG2A6NM03 316 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 NOBOXO60393 691 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 IMPDH1P20839 514 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 MXD1Q05195 221 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 NADK2Q4G0N4 442 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 IFI44LQ53G44 452 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 ZNF433Q8N7K0 673 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 SIDT2Q8NBJ9 832 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 NTAN1Q96AB6 310 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 M0R2N6 131 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 CACNB4O00305 520 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 CCNB2O95067 398 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 POU2F1P14859 743 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 CLK3P49761 638 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 MADCAM1Q13477 382 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 SF1Q15637 639 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 IRAK1BP1Q5VVH5 260 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 OLFML2AQ68BL7 652 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 ANO7Q6IWH7 933 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 PHC3Q8NDX5 983 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 FCGR1BQ92637 280 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 TIE1P35590 1138 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 MAPK12P53778 367 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 FIBCD1Q8N539 461 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 EBPLQ9BY08 206 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 TRPV5Q9NQA5 729 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 CCDC59Q9P031 241 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 OAZ3Q9UMX2 235 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 RUVBL1Q9Y265 456 aaKnown RBP12.95□□□□□ -0.34
LCA5-202ENST00000392959 DHRS7Q9Y394 339 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 PCDHGA11Q9Y5H2 935 aa12.95□□□□□ -0.34
LCA5-202ENST00000392959 RGS20O76081 388 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 TPTEP56180 551 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 GPX6P59796 221 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 RAPSNQ13702 412 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 KCNA10Q16322 511 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 RNASE12Q5GAN4 147 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 CIR1Q86X95 450 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 GLIS1Q8NBF1 620 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 TAMM41Q96BW9 452 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PMF1-BGLAPU3KQ54 211 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 TBX1O43435 398 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 HERVK_113P63132 956 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 DPY19L1Q2PZI1 675 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 CXorf57Q6NSI4 855 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 USP30Q70CQ3 517 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 KAT2AQ92830 837 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 ERVK-6Q9BXR3 956 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 PHPT1Q9NRX4 125 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 ZFP37Q9Y6Q3 630 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 HCN1O60741 890 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms