RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ANGPTL3Q9Y5C1 460 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDHGB7Q9Y5F8 929 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDHGA2Q9Y5H1 932 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP46A1Q9Y6A2 500 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CFAP20Q9Y6A4 193 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PTCH2Q9Y6C5 1203 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PIAS3Q9Y6X2 628 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SPATA31D1Q6ZQQ2 1576 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NLRC5Q86WI3 1866 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CACNA1DQ01668 2161 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HECTD4Q9Y4D8 3996 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGSF9BQ9UPX0 1349 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LRP1BQ9NZR2 4599 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 EPG5Q9HCE0 2579 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LTBP4Q8N2S1 1624 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAT2Q9NYQ8 4349 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 APC2O95996 2303 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SONP18583 2426 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ALMS1Q8TCU4 4167 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGKV1OR2-108A0A075B7D4 117 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHV3-16A0A0C4DH30 117 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LOC102723971A0A1B0GUV8 181 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 A0A1W2PNN7 141 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 A0A1W2PR80 420 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TCRBV7S3A2A0A539 114 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FSD2A1L4K1 749 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A18PA6NE21 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A16PA6NEW6 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CAPN8A6NHC0 703 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MSGN1A6NI15 193 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 AQP7P3A6NL99 342 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A9PA6NNJ1 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RHPN2P1A8MT19 583 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF891A8MT65 544 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A5PA8MXJ8 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF487B1APH4 448 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PRSS46E5RG02 174 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TMX2-CTNND1H3BSU7 103 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RPL36A-HNRNPH2H7BZ11 118 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PDHXO00330 501 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACKR2O00590 384 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SMAD9O15198 467 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP6V0E1O15342 81 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SOCS1O15524 211 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 KLK10O43240 276 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HOXC11O43248 304 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZSCAN12O43309 604 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 BUD23O43709 281 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR137BO60478 399 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF253O75346 499 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GPC4O75487 556 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TUSC2O75896 110 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 STK10O94804 968 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NDUFB4O95168 129 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IL18RAPO95256 599 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 DDAH2O95865 285 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHEP01854 428 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHG3P01860 377 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HLA-DQA2P01906 255 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ALDOAP04075 364 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GPIP06744 558 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 THP07101 528 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 QDPRP09417 244 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A15PP0C7V4 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A14PP0C7W9 464 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 JMJD7P0C870 316 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TFPIP10646 304 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PCP11498 1178 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OSMP13725 252 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TCF3P15923 654 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MUC1P15941 1255 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IGFBP2P18065 325 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PSMB1P20618 241 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FUT3P21217 361 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TNFAIP3P21580 790 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IBSPP21815 317 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CDH3P22223 829 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LHCGRP22888 699 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NPY1RP25929 384 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACADLP28330 430 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 EPHA2P29317 976 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NTSR1P30989 418 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGAP37287 484 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MDH2P40926 338 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RPS9P46781 194 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ARCN1P48444 511 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NRIP1P48552 1158 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PTDSS1P48651 473 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP4BP51164 291 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 P2RY4P51582 365 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ARSEP51690 589 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR143P51810 404 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PRELPP51888 382 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ITGA8P53708 1063 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC16A1P53985 500 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PNLIPRP2P54317 469 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OAZ1P54368 228 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GALCP54803 685 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms