RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 NR1H2P55055 460 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 HMGCS1Q01581 520 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 AAK1Q2M2I8 961 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 LYSMD3Q7Z3D4 306 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 RIN3Q8TB24 985 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 ASB2Q96Q27 587 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 TNKS2Q9H2K2 1166 aa11.92□□□□□ -0.5
CAPRIN1-202ENST00000389645 LINC00271P0C7V0 271 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 MYOGP15173 224 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 SLC6A2P23975 617 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 DNAJB1P25685 340 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 POLR2JP52435 117 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 ATP6V0D1P61421 351 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 STK32CQ86UX6 486 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 L3HYPDHQ96EM0 354 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 NSMCE2Q96MF7 247 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 PSKH2Q96QS6 385 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 HOPXQ9BPY8 73 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 ARMC7Q9H6L4 198 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 NDUFA13Q9P0J0 144 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 GON4LQ3T8J9 2241 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 FOXD2O60548 495 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 LILRB3O75022 631 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 CLDN11O75508 207 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 KPNA1P52294 538 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 TRAF2Q12933 501 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 AP5B1Q2VPB7 878 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 PLPP4Q5VZY2 271 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 TCEAL8Q8IYN2 117 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 AHI1Q8N157 1196 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 OR10Q1Q8NGQ4 319 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 GFM2Q969S9 779 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 SLCO4A1Q96BD0 722 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 KLF16Q9BXK1 252 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 NSUN3Q9H649 340 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 HCFC1R1Q9NWW0 138 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 TMEM181Q9P2C4 612 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 PRKAG2Q9UGJ0 569 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 PENKP01210 267 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 CDH4P55283 916 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 PRKG2Q13237 762 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 CPSF6Q16630 551 aaKnown RBP eCLIP11.91□□□□□ -0.58e-17■■■■■ 29
CAPRIN1-202ENST00000389645 DET1Q7L5Y6 550 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 ZBP1Q9H171 429 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 CIDEBQ9UHD4 219 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 TRANK1O15050 2925 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
CAPRIN1-202ENST00000389645 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 H3BNC9 293 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TRIM24O15164 1050 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 CCL16O15467 120 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 H6PDO95479 791 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 PRAMEF12O95522 483 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 LDLRP01130 860 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 F11P03951 625 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TAF1AQ15573 450 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TGFBIQ15582 683 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 HMBOX1Q6NT76 420 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TEX26Q8N6G2 289 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 ROPN1LQ96C74 230 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 ZBTB18Q99592 522 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TCF25Q9BQ70 676 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 ADI1Q9BV57 179 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 BOCQ9BWV1 1114 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 IPPKQ9H8X2 491 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 NLE1Q9NVX2 485 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 CPQQ9Y646 472 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 SLC25A14O95258 325 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 MLYCDO95822 493 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 GSNP06396 782 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 G6PDP11413 515 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 BMP1P13497 986 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 CSRP3P50461 194 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 PTGR1Q14914 329 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 UGT3A2Q3SY77 523 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 ADGRF1Q5T601 910 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 SDCCAG3Q96C92 435 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 NSMCE3Q96MG7 304 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 DERL2Q9GZP9 239 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 PNPLA3Q9NST1 481 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 LEF1Q9UJU2 399 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 U3KQV3 271 aa11.9□□□□□ -0.5
CAPRIN1-202ENST00000389645 A0A1B0GVM2 712 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 SEC22BO75396 215 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 RFPL2O75678 378 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 ESRRBO95718 433 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 GSTT2P0CG29 244 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 GSTT2BP0CG30 244 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 CTSAP10619 480 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 HOXB8P17481 243 aaPredicted RBP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms