RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 KLF7O75840 302 aaPredicted RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 HLA-DQB2P05538 268 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 CBSLP0DN79 551 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 RARAP10276 462 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 MTHFD1P11586 935 aaKnown RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 TCF4P15884 667 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 CBSP35520 551 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 TSFMP43897 325 aaKnown RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 KRTAP10-9P60411 292 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 MMRN1Q13201 1228 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 BECN1Q14457 450 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 KRT81Q14533 505 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 GSE1Q14687 1217 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 DPYSL2Q16555 572 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 ZNF630Q2M218 657 aaPredicted RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 BOLA3Q53S33 107 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 IRAK1BP1Q5VVH5 260 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 PDPK2PQ6A1A2 396 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 PLEKHA7Q6IQ23 1121 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 TMEM220Q6QAJ8 160 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 BNC2Q6ZN30 1099 aaPredicted RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 PPP4R1Q8TF05 950 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 MAML1Q92585 1016 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 RELTQ969Z4 430 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 PCDH18Q9HCL0 1135 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 OLAHQ9NV23 265 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 IFT80Q9P2H3 777 aaPredicted RBP9.37□□□□□ -0.91
IFT88-203ENST00000389373 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 OR2AG2A6NM03 316 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 MFSD11O43934 449 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 KCNJ13O60928 360 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 HBQ1P09105 142 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ATP1A3P13637 1013 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 PVRP15151 417 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 HLA-DPA1P20036 260 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 EEF1GP26641 437 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 SSTR2P30874 369 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 DCDC1P59894 354 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 AIMP2Q13155 320 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 TESK1Q15569 626 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 PCSK7Q16549 785 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 DPCR1Q3MIW9 517 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ATP13A5Q4VNC0 1218 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ZNF789Q5FWF6 425 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ZFYVE27Q5T4F4 411 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 AGAP7PQ5VUJ5 663 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 GFRALQ6UXV0 394 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 LINC00696Q6ZRV3 163 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 TMC3Q7Z5M5 1100 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 LRRC49Q8IUZ0 686 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 TMEM151BQ8IW70 566 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 GPR135Q8IZ08 494 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 BCORP1Q8N888 145 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
IFT88-203ENST00000389373 CCNYQ8ND76 341 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 CATSPER1Q8NEC5 780 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 OR1N1Q8NGS0 311 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 PTERQ96BW5 349 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 CCDC120Q96HB5 630 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 AGAP4Q96P64 663 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 C17orf62Q9BQA9 187 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 DPH2Q9BQC3 489 aaPredicted RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 TRIM8Q9BZR9 551 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 EPS8L2Q9H6S3 715 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 SYTL2Q9HCH5 934 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 C1GALT1Q9NS00 363 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 CDYLQ9Y232 598 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 ZNF711Q9Y462 761 aa9.36□□□□□ -0.91
IFT88-203ENST00000389373 MDC1Q14676 2089 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 DIDO1Q9BTC0 2240 aaKnown RBP9.36□□□□□ -0.91
IFT88-203ENST00000389373 PDZD2O15018 2839 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 A0A1B0GTL3 188 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A9O60656 530 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 POLBP06746 335 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 MMP2P08253 660 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A6P19224 532 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A1P22309 533 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 UGT1A4P22310 534 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 CCNCP24863 283 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 PCK1P35558 622 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 CTSCP53634 463 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 SOX8P57073 446 aa9.35□□□□□ -0.91
IFT88-203ENST00000389373 DCDP81605 110 aaKnown RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 OTUD4Q01804 1114 aaKnown RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 SRSF11Q05519 484 aaKnown RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 PRKD1Q15139 912 aaPredicted RBP9.35□□□□□ -0.91
IFT88-203ENST00000389373 KRT31Q15323 416 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms