RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PCDHB1Q9Y5F3 818 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 PKMP14618 531 aaKnown RBP13.81□□□□□ -0.2
SNPH-201ENST00000381867 CTPS1P17812 591 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 SCNN1AP37088 669 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 AP1S2P56377 157 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 VBP1P61758 197 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 LCP2Q13094 533 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 TARBP2Q15633 366 aaKnown RBP13.81□□□□□ -0.2
SNPH-201ENST00000381867 MON1BQ7L1V2 547 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 XYLT1Q86Y38 959 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 NPLOC4Q8TAT6 608 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 COPS4Q9BT78 406 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 CNPPD1Q9BV87 410 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 MARCH7Q9H992 704 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 NOL4O94818 638 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 ACAP2Q15057 778 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 CCL14Q16627 93 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 PARP15Q460N3 678 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 MPPE1Q53F39 396 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 ZNF697Q5TEC3 545 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 CLEC6AQ6EIG7 209 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
SNPH-201ENST00000381867 KCNS3Q9BQ31 491 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 TAS2R7Q9NYW3 318 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 NUDT4Q9NZJ9 180 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 MYH3P11055 1940 aa13.81□□□□□ -0.2
SNPH-201ENST00000381867 ALDH3A2P51648 485 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 LILRA4P59901 499 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ZNF613Q6PF04 617 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 FAM124AQ86V42 546 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ZNF433Q8N7K0 673 aaPredicted RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 C12orf29Q8N999 325 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ERMAPQ96PL5 475 aaPredicted RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 C12orf4Q9NQ89 552 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ACSS2Q9NR19 701 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 TAS2R1Q9NYW7 299 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 TIMM22Q9Y584 194 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 GTPBP1O00178 669 aaKnown RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 GABRR2P28476 465 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 OR2B6P58173 313 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 DCST1Q5T197 706 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 GPR158Q5T848 1215 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ZDHHC20Q5W0Z9 365 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 NETO2Q8NC67 525 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 C10orf82Q8WW14 230 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 CLIP3Q96DZ5 547 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MYOCQ99972 504 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 KCNN2Q9H2S1 579 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 DNAJC11Q9NVH1 559 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 TBX1O43435 398 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 NPHS1O60500 1241 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 AP2A1O95782 977 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 PTX3P26022 381 aaPredicted RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 CLCQ05315 142 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 FPGSQ05932 587 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ANKRD22Q5VYY1 191 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 SIPA1Q96FS4 1042 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 FGFBP2Q9BYJ0 223 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 TNKS2Q9H2K2 1166 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 CD320Q9NPF0 282 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 FETUBQ9UGM5 382 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 H0Y858 1186 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MAGEB3O15480 346 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MFSD11O43934 449 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 JAG1P78504 1218 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 PAOXQ6QHF9 649 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 FCRL2Q96LA5 508 aaPredicted RBP13.8□□□□□ -0.2
SNPH-201ENST00000381867 GBA3Q9H227 469 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 PTPRJQ12913 1337 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 SLC22A1O15245 554 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ALDH4A1P30038 563 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 CCNFP41002 786 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 SLC10A6Q3KNW5 377 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ULK3Q6PHR2 472 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MCMBPQ9BTE3 642 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 ABCG4Q9H172 646 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 MAGEE1Q9HCI5 957 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 KCTD5Q9NXV2 234 aa13.8□□□□□ -0.2
SNPH-201ENST00000381867 PRKD3O94806 890 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 ZNF432O94892 652 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
SNPH-201ENST00000381867 CCL5P13501 91 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 MAZP56270 477 aaKnown RBP13.79□□□□□ -0.2
SNPH-201ENST00000381867 PHC1P78364 1004 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 MXD1Q05195 221 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 HEXDCQ8WVB3 486 aa13.79□□□□□ -0.2
SNPH-201ENST00000381867 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
SNPH-201ENST00000381867 PLD4Q96BZ4 506 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms