RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LEPRP48357 1165 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 EMC10Q5UCC4 262 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 KLHDC10Q6PID8 442 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 AMIGO2Q86SJ2 522 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 OR10G6Q8NH81 332 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 COL26A1Q96A83 441 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 MOCOSQ96EN8 888 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 MAGEB10Q96LZ2 347 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 CAPN8A6NHC0 703 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 HHLA1C9JL84 531 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 LEFTY1O75610 366 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 GABBR2O75899 941 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC35E2BP0CK96 405 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 ADSLP30566 484 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC6A4P31645 630 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 HNF1BP35680 557 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 CCR10P46092 362 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 GPRC6AQ5T6X5 926 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 LPCAT2Q7L5N7 544 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 C11orf74Q86VG3 221 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 RAD51AP1Q96B01 352 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 TBC1D23Q9NUY8 699 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 DOCK1Q14185 1865 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 S1PR4O95977 384 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 GSNP06396 782 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 VIPR1P32241 457 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 GDF5P43026 501 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 MAGEA6P43360 314 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 POLR2JP52435 117 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SF1Q15637 639 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 TXNDC5Q8NBS9 432 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 KCNJ9Q92806 393 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 PEX13Q92968 403 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 MAGEE1Q9HCI5 957 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 CDH22Q9UJ99 828 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 PSME2Q9UL46 239 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 AGRPO00253 132 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 TNFRSF10BO14763 440 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 MMP20O60882 483 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ERAL1O75616 437 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 LATS1O95835 1130 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 LYNP07948 512 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 FGF3P11487 239 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF37AP17032 561 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC26A3P40879 764 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 GALNT13Q8IUC8 556 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ZDHHC13Q8IUH4 622 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 CEP97Q8IW35 865 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 NXPE1Q8N323 547 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 KIAA1191Q96A73 305 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC39A13Q96H72 371 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 CLOCKO15516 846 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 RECQL5O94762 991 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF549Q6P9A3 640 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SKA1Q96BD8 255 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 HOPXQ9BPY8 73 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ZSCAN5AQ9BUG6 496 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 SCN3BQ9NY72 215 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 ENTPD4Q9Y227 616 aa13.97□□□□□ -0.17
SHROOM1-203ENST00000378679 GSAPA4D1B5 854 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 GUCY1B2O75343 617 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 TRBC1P01850 177 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 EPORP19235 508 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 KIR3DL1P43629 444 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 DAB2P98082 770 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 GSTA3Q16772 222 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC5A9Q2M3M2 681 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 AMZ2Q86W34 360 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 CLVS1Q8IUQ0 354 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 ZDHHC4Q9NPG8 344 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 BHMG1C9JSJ3 638 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 RB1P06400 928 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF30P17039 623 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 GNAZP19086 355 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 GRSF1Q12849 480 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 NFATC2Q13469 925 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 LRRC26Q2I0M4 334 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 PGAM4Q8N0Y7 254 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 FAM156AQ8NDB6 213 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 NUS1Q96E22 293 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 MTERF1Q99551 399 aaKnown RBP13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 CACNA2D2Q9NY47 1150 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 MAPRE3Q9UPY8 281 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 AP3M1Q9Y2T2 418 aa13.96□□□□□ -0.17
SHROOM1-203ENST00000378679 EDDM13A0A1B0GTR0 161 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 DHRS12A0PJE2 317 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 BBIP1A8MTZ0 92 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 AURKAO14965 403 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 ATP1B2P14415 290 aaPredicted RBP13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 HMGCS1Q01581 520 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 OCA2Q04671 838 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 PDK3Q15120 406 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms