RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 FAM83HQ6ZRV2 1179 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-204ENST00000377349 PPP1R3BQ86XI6 285 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 TAB3Q8N5C8 712 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-204ENST00000377349 UBL4BQ8N7F7 174 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 CT55Q8WUE5 264 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 NAT14Q8WUY8 206 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 ZDHHC12Q96GR4 267 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 AKIRIN1Q9H9L7 192 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-204ENST00000377349 IL17CQ9P0M4 197 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 LNPEPQ9UIQ6 1025 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 PSMD13Q9UNM6 376 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 POLHQ9Y253 713 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 PCDHB3Q9Y5E6 796 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 ANKRD12Q6UB98 2062 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 A0A0U1RQJ8 604 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 GOLGA6L9A6NEM1 432 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 C2orf81A6NN90 581 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 GAPDHSO14556 408 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-204ENST00000377349 CREG1O75629 220 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 PRAMEF1O95521 474 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 PDGFAP04085 211 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 FOLR1P15328 257 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 MSH3P20585 1137 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 FECHP22830 423 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 CTSCP53634 463 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 DMPKQ09013 629 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 DNASE1L3Q13609 305 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 LAMB3Q13751 1172 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 ITGA9Q13797 1035 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 KCNAB1Q14722 419 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 LDLRAP1Q5SW96 308 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 IRGCQ6NXR0 463 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 ARHGEF18Q6ZSZ5 1173 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 RASGEF1AQ8N9B8 481 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 OR4K2Q8NGD2 314 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 DTX3LQ8TDB6 740 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 RUFY1Q96T51 708 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 GORASP1Q9BQQ3 440 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 LHX9Q9NQ69 397 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 AAR2Q9Y312 384 aaKnown RBP18.74■□□□□ 0.59
CBWD3-204ENST00000377349 UNC79Q9P2D8 2635 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 BTNL10A8MVZ5 291 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 KATNA1O75449 491 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 RECKO95980 971 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 HALP42357 657 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 PMS2P54278 862 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 FNBP1LQ5T0N5 605 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 GPRC6AQ5T6X5 926 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 PWWP2BQ6NUJ5 590 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 CERS6Q6ZMG9 384 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 SYCE1Q8N0S2 351 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 TXLNBQ8N3L3 684 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 LRRC57Q8N9N7 239 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 BRSK1Q8TDC3 778 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 SPATA13Q96N96 652 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 KCND3Q9UK17 655 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 TLK1Q9UKI8 766 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 PADI1Q9ULC6 663 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 MAN2B2Q9Y2E5 1009 aa18.73■□□□□ 0.59
CBWD3-204ENST00000377349 CDC14CA4D256 554 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 MKRN2OSH3BPM6 223 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 ATXN8OSP0DMR3 200 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 LPOP22079 712 aaPredicted RBP18.72■□□□□ 0.59
CBWD3-204ENST00000377349 PTPN7P35236 360 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 TUBB3Q13509 450 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 RPE65Q16518 533 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 TMEM220Q6QAJ8 160 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 AMZ2Q86W34 360 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 BEND7Q8N7W2 519 aaPredicted RBP18.72■□□□□ 0.59
CBWD3-204ENST00000377349 DDHD1Q8NEL9 900 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 LRRC45Q96CN5 670 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 TBL1YQ9BQ87 522 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 TRIM55Q9BYV6 548 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 ASB8Q9H765 288 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
CBWD3-204ENST00000377349 EFR3BQ9Y2G0 817 aa18.72■□□□□ 0.59
CBWD3-204ENST00000377349 KCNJ13O60928 360 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 RFPL1O75677 317 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 POP7O75817 140 aaKnown RBP18.71■□□□□ 0.59
CBWD3-204ENST00000377349 DNAJB5O75953 348 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 MLLT10P55197 1068 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 NFE2L1Q14494 772 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 TAF1AQ15573 450 aaPredicted RBP18.71■□□□□ 0.59
CBWD3-204ENST00000377349 APLFQ8IW19 511 aaPredicted RBP18.71■□□□□ 0.59
CBWD3-204ENST00000377349 FAM71DQ8N9W8 422 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 ZNF398Q8TD17 642 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 UBXN4Q92575 508 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 PSMG3-AS1Q96PY0 264 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 MAP3K3Q99759 626 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 TWSG1Q9GZX9 223 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 ACTL8Q9H568 366 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 CRLS1Q9UJA2 301 aa18.71■□□□□ 0.59
CBWD3-204ENST00000377349 CFAP20Q9Y6A4 193 aaKnown RBP18.71■□□□□ 0.59
CBWD3-204ENST00000377349 C21orf140B9A014 251 aa18.7■□□□□ 0.58
CBWD3-204ENST00000377349 CCL22O00626 93 aa18.7■□□□□ 0.58
CBWD3-204ENST00000377349 MT-ND3P03897 115 aa18.7■□□□□ 0.58
CBWD3-204ENST00000377349 CCNYL3P0C7X3 344 aa18.7■□□□□ 0.58
CBWD3-204ENST00000377349 EBLN1P0CF75 366 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms