RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.378e-10■■■■□ 21.6
USP11-204ENST00000377107 ZFYVE1Q9HBF4 777 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ARL15Q9NXU5 204 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 UTS2RQ9UKP6 389 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 KCNH1O95259 989 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 GALTP07902 379 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 MYCLP1P12525 358 aaPredicted RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 WEE1P30291 646 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 KPNA1P52294 538 aaPredicted RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 NFKB2Q00653 900 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 BNIP3Q12983 259 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 MYLKQ15746 1914 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 AARS2Q5JTZ9 985 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 C16orf87Q6PH81 154 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 EFL1Q7Z2Z2 1120 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 ZDHHC13Q8IUH4 622 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 LKAAEAR1Q8TD35 194 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 SGCDQ92629 289 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 OR52E6Q96RD3 313 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 CGREF1Q99674 301 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 GPATCH1Q9BRR8 931 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ANKRD60Q9BZ19 345 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 PCDHA9Q9Y5H5 950 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ZFC3H1O60293 1989 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 TSC2P49815 1807 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ZNF840PA6NDX5 716 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 H7C4K7 107 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 E2F3O00716 465 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 CA12O43570 354 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 DEAF1O75398 565 aaPredicted RBP12.72□□□□□ -0.37
USP11-204ENST00000377107 DIRAS1O95057 198 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 RFC2P35250 354 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 MAGEA11P43364 429 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ATP4BP51164 291 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 HPCAP84074 193 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ARF5P84085 180 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TNK2Q07912 1038 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 RCAN2Q14206 197 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 HID1Q8IV36 788 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TBC1D21Q8IYX1 336 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 BCL7CQ8WUZ0 217 aaPredicted RBP12.72□□□□□ -0.37
USP11-204ENST00000377107 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
USP11-204ENST00000377107 SMG9Q9H0W8 520 aaKnown RBP12.72□□□□□ -0.37
USP11-204ENST00000377107 FANCEQ9HB96 536 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 PARVBQ9HBI1 364 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 FNIP2Q9P278 1114 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 PRSS21Q9Y6M0 314 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 DGKBQ9Y6T7 804 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 FAM234BA2RU67 622 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 AOC2O75106 756 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 FCGR1AP12314 374 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 HSD17B1P14061 328 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ITGALP20701 1170 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ITPKAP23677 461 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 CAPGP40121 348 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 CASP9P55211 416 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TYSND1Q2T9J0 566 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TNIP2Q8NFZ5 429 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 WFDC5Q8TCV5 224 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ISOC1Q96CN7 298 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 DTNBP1Q96EV8 351 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TRIB3Q96RU7 358 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ATG10Q9H0Y0 220 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 MARCH5Q9NX47 278 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 LOC730098B7Z3J9 87 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 SEC24AO95486 1093 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 GPIP06744 558 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ANXA6P08133 673 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 CCT8P50990 548 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 PHEXP78562 749 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 ATP1A4Q13733 1029 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 FGD3Q5JSP0 725 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 TSPAN33Q86UF1 283 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 RNF175Q8N4F7 328 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 MYO19Q96H55 970 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 PDFQ9HBH1 243 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms