RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ANKRD66B4E2M5 251 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 CHUKO15111 745 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 PIRTP0C851 137 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 ZNF7P17097 686 aaPredicted RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 PTPN4P29074 926 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 CD68P34810 354 aaPredicted RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 DCTP40126 519 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 PTGIRP43119 386 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 GALNT3Q14435 633 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 CCDC181Q5TID7 509 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 FAM69BQ5VUD6 431 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 Q8NA96 180 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 THAP4Q8WY91 577 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 GLYATL1Q969I3 302 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 ZDHHC12Q96GR4 267 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 C16orf45Q96MC5 204 aaPredicted RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 TRIB3Q96RU7 358 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
CLCN6-205ENST00000376492 ADGRE3Q9BY15 652 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 TRIM39Q9HCM9 518 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 ACSS2Q9NR19 701 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 MAP10Q9P2G4 905 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 RARRES3Q9UL19 164 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
CLCN6-205ENST00000376492 LRBAP50851 2863 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 RGSL1A5PLK6 1076 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 H7C0C1 242 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 RBL1P28749 1068 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 CASQ1P31415 396 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 ATP5OP48047 213 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 TUBB4BP68371 445 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 KLF1Q13351 362 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 MEI1Q5TIA1 1274 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 JMJD6Q6NYC1 403 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 PID1Q7Z2X4 250 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 SYVN1Q86TM6 617 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 LRRTM4Q86VH4 590 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 SIDT2Q8NBJ9 832 aaKnown RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 GPR150Q8NGU9 434 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 SPATA22Q8NHS9 363 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 CXorf40BQ96DE9 158 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 TCTN2Q96GX1 697 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 TIMM29Q9BSF4 260 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 GPR87Q9BY21 358 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 EPHA6Q9UF33 1036 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 ERRFI1Q9UJM3 462 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-205ENST00000376492 SHOC2Q9UQ13 582 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 CELSR2Q9HCU4 2923 aa12.84□□□□□ -0.35
CLCN6-205ENST00000376492 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 KMOO15229 486 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 DDAH2O95865 285 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 MT-CYBP00156 380 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 EPOP01588 193 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 GPR89BP0CG08 455 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 RBP3P10745 1247 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 TCP1P17987 556 aaKnown RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 EIF3EP60228 445 aaKnown RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 CDK18Q07002 472 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 CHRNA6Q15825 494 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 MAP3K3Q99759 626 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 ZSCAN5AQ9BUG6 496 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 RAB33BQ9H082 229 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 C10orf88Q9H8K7 445 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 ZFYVE1Q9HBF4 777 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 FGF21Q9NSA1 209 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 SEMA5BQ9P283 1151 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 TMPRSS11EQ9UL52 423 aa12.83□□□□□ -0.36
CLCN6-205ENST00000376492 PRRC2CQ9Y520 2896 aaKnown RBP12.83□□□□□ -0.36
CLCN6-205ENST00000376492 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 LOC285095A0A1B0GVY8 99 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 CEACAM4O75871 244 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 NFKB1P19838 968 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 DCDC1P59894 354 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 RPS15P62841 145 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms