RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 OTULINQ96BN8 352 aa14.18□□□□□ -0.14
TNFRSF1B-201ENST00000376259 REXO5Q96IC2 774 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FAM124BQ9H5Z6 455 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ASB1Q9Y576 335 aa14.18□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ELOVL7A1L3X0 281 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KERAO60938 352 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MITFO75030 526 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ANGPTL1O95841 491 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MAGEA12P43365 314 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CCL23P55773 120 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ERVK-8P63133 956 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KCNAB2Q13303 367 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HM13Q8TCT9 377 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MTERF1Q99551 399 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TLR6Q9Y2C9 796 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 K7ERQ8 282 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RFXANKO14593 260 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RFC2P35250 354 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MAP2K4P45985 399 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 NUDT6P53370 316 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 IL10RBQ08334 325 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DAG1Q14118 895 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BLOC1S3Q6QNY0 202 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SERPINA9Q86WD7 417 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HID1Q8IV36 788 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MCOLN3Q8TDD5 553 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SLC13A3Q8WWT9 602 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 NODALQ96S42 347 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PTPN18Q99952 460 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BOCQ9BWV1 1114 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 IMPAD1Q9NX62 359 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 C3orf18Q9UK00 162 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SEC24AO95486 1093 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 OPN1SWP03999 348 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CLCN2P51788 898 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 VBP1P61758 197 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ABRAXAS2Q15018 415 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CYP2A13Q16696 494 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TMEM236Q5W0B7 351 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GPR153Q6NV75 609 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LETMD1Q6P1Q0 360 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SYT12Q8IV01 421 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ADHFE1Q8IWW8 467 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DTWD1Q8N5C7 304 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 COX4I2Q96KJ9 171 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 VPS9D1Q9Y2B5 631 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SH3GLB1Q9Y371 365 aa14.17□□□□□ -0.14
TNFRSF1B-201ENST00000376259 WNK3Q9BYP7 1800 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 H3BMQ9 156 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 WDR47O94967 919 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 OTCP00480 354 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KRT6AP02538 564 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KRT6BP04259 564 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KRT6CP48668 564 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ABRQ12979 859 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■□□ 14.6
TNFRSF1B-201ENST00000376259 NHSL2Q5HYW2 709 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 COG8Q96MW5 612 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RTP3Q9BQQ7 232 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LRTM1Q9HBL6 345 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CXCR6O00574 342 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FFAR2O15552 330 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 VPS4BO75351 444 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MSH3P20585 1137 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SERPINB10P48595 397 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ERVPABLB-1P60509 514 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 VEPH1Q14D04 833 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SF1Q15637 639 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DOK6Q6PKX4 331 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CENPSQ8N2Z9 138 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SLC15A4Q8N697 577 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FAM86B1Q8N7N1 296 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KIAA1191Q96A73 305 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ARHGAP39Q9C0H5 1083 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TPK1Q9H3S4 243 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TFB2MQ9H5Q4 396 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TMEM161AQ9NX61 479 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PDP1Q9P0J1 537 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MAGEL2Q9UJ55 1249 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DNMT3LQ9UJW3 386 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PCDHB3Q9Y5E6 796 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TCRBV3S1A0A5B6 114 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LOC730098B7Z3J9 87 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GBAP04062 536 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 COX7A2P14406 83 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GNPDA1P46926 289 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BCL2L1Q07817 233 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 STARD3Q14849 445 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SULT1C3Q6IMI6 304 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CROCCP3Q8IVE0 287 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FUBP1Q96AE4 644 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MYEOVQ96EZ4 313 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 NSMCE3Q96MG7 304 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms