RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 GALNT11Q8NCW6 608 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 RNF31Q96EP0 1072 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 QKIQ96PU8 341 aaKnown RBP eCLIP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 INSM2Q96T92 566 aaPredicted RBP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 CCM2Q9BSQ5 444 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 RSPH14Q9UHP6 348 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 SLC24A2Q9UI40 661 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 VPS4AQ9UN37 437 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 C5orf60A6NFR6 353 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 MFAP3LO75121 409 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 RALBP11234 206 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 PTMSP20962 102 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 LPOP22079 712 aaPredicted RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 GEMP55040 296 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 MLLT10P55197 1068 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 TAF1AQ15573 450 aaPredicted RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 PAPD7Q5XG87 772 aaKnown RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 ITPRIPL1Q6GPH6 555 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 HPS6Q86YV9 775 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 CNGA4Q8IV77 575 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 KATNAL2Q8IYT4 538 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 HEXDCQ8WVB3 486 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 ZNF501Q96CX3 271 aaPredicted RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 RBM41Q96IZ5 413 aaKnown RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 PSMG3-AS1Q96PY0 264 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 SLC25A23Q9BV35 468 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 WWP1Q9H0M0 922 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 MLXIPLQ9NP71 852 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 ACSS2Q9NR19 701 aa22.63■■□□□ 1.21
C9orf47-202ENST00000375850 G3BP2Q9UN86 482 aaKnown RBP22.63■■□□□ 1.21
C9orf47-202ENST00000375850 hCG_1818297A0A087WSY0 165 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 TTLL8A6PVC2 850 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 RAB40ALP0C0E4 278 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 MSL3P1P0C860 447 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 PBLDP30039 288 aaPredicted RBP22.62■■□□□ 1.21
C9orf47-202ENST00000375850 VSTM4Q8IW00 320 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 CPT1BQ92523 772 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 MR1Q95460 341 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 ULK4Q96C45 1275 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 DCUN1D1Q96GG9 259 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 GBA3Q9H227 469 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 ASB8Q9H765 288 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 C1GALT1Q9NS00 363 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 SOHLH2Q9NX45 425 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 HYOU1Q9Y4L1 999 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 ALG6Q9Y672 507 aa22.62■■□□□ 1.21
C9orf47-202ENST00000375850 OR6C74A6NCV1 312 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 GPR39O43194 453 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 MAP3K7O43318 606 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 SRP72O76094 671 aaKnown RBP22.61■■□□□ 1.21
C9orf47-202ENST00000375850 LAMB3Q13751 1172 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 KRT33BQ14525 404 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 GSE1Q14687 1217 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 FAM199XQ6PEV8 388 aaPredicted RBP22.61■■□□□ 1.21
C9orf47-202ENST00000375850 HM13Q8TCT9 377 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 PPP1R2P1Q96PQ5 205 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 TRIM55Q9BYV6 548 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 ING2Q9H160 280 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 LRRC4CQ9HCJ2 640 aa22.61■■□□□ 1.21
C9orf47-202ENST00000375850 AAR2Q9Y312 384 aaKnown RBP22.61■■□□□ 1.21
C9orf47-202ENST00000375850 CFAP20Q9Y6A4 193 aaKnown RBP22.61■■□□□ 1.21
C9orf47-202ENST00000375850 C17orf113A0A1B0GUU1 675 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 AGAP14A8MT82 685 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 CFAP99D6REC4 459 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 BUD23O43709 281 aaKnown RBP22.6■■□□□ 1.21
C9orf47-202ENST00000375850 ZNF189O75820 626 aaPredicted RBP22.6■■□□□ 1.21
C9orf47-202ENST00000375850 DNAJB5O75953 348 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 CRTAMO95727 393 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 VARSP26640 1264 aaKnown RBP22.6■■□□□ 1.21
C9orf47-202ENST00000375850 CAPRIN2Q6IMN6 1127 aaKnown RBP22.6■■□□□ 1.21
C9orf47-202ENST00000375850 DET1Q7L5Y6 550 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 CCDC50Q8IVM0 306 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 ACVR1CQ8NER5 493 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 CPT1CQ8TCG5 803 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 AKIRIN1Q9H9L7 192 aaPredicted RBP22.6■■□□□ 1.21
C9orf47-202ENST00000375850 POMT2Q9UKY4 750 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 ZNF451Q9Y4E5 1061 aa22.6■■□□□ 1.21
C9orf47-202ENST00000375850 RELNP78509 3460 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 APOC4-APOC2K7ER74 178 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 MEN1O00255 615 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 APOC2P02655 101 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 PDGFAP04085 211 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 CA5AP35218 305 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 PRLHRP49683 370 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 KPNA2P52292 529 aaKnown RBP22.59■■□□□ 1.21
C9orf47-202ENST00000375850 RPS18P62269 152 aaKnown RBP22.59■■□□□ 1.21
C9orf47-202ENST00000375850 ADCY2Q08462 1091 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 GPS2Q13227 327 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 PRPSAP1Q14558 356 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 GPR19Q15760 415 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 RANBP10Q6VN20 620 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 CERS6Q6ZMG9 384 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 BBS12Q6ZW61 710 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 OR4K2Q8NGD2 314 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 LRRC45Q96CN5 670 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 RUFY1Q96T51 708 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 NLNQ9BYT8 704 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 ARL5AQ9Y689 179 aa22.59■■□□□ 1.21
C9orf47-202ENST00000375850 CDH3P22223 829 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms