RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 UBXN8O00124 270 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 SNPHO15079 494 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 SLC22A1O15245 554 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 MATN4O95460 622 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 MZF1P28698 734 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 DIO3P55073 304 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 RPS6KA2Q15349 733 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 CRY1Q16526 586 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FCRL2Q96LA5 508 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 ALG9Q9H6U8 611 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 MOV10Q9HCE1 1003 aaKnown RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 LRFN2Q9ULH4 789 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 PCDHGA3Q9Y5H0 932 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 NOBOXO60393 691 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 RFPL2O75678 378 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 PRSS23O95084 383 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 HGFP14210 728 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 SPNP16150 400 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 EIF2DP41214 584 aaKnown RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 EMX1Q04741 257 aaPredicted RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 SPATS1Q496A3 300 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 AASDHQ4L235 1098 aaPredicted RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 FAM209AQ5JX71 171 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 TTC23Q5W5X9 447 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 SLC22A9Q8IVM8 553 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 CALML6Q8TD86 181 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 TWIST2Q8WVJ9 160 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 TRMOQ9BU70 441 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 TUBB1Q9H4B7 451 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 ABCC13Q9NSE7 274 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 NAALAD2Q9Y3Q0 740 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 LRRC14BA6NHZ5 514 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 ZBBXA8MT70 800 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 SLC1A7O00341 560 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 ASNA1O43681 348 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 MT-CYBP00156 380 aaPredicted RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 F9P00740 461 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 RBP1P09455 135 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 CASP2P42575 452 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 EFEMP1Q12805 493 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 DUSP4Q13115 394 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 PAGE2Q7Z2X7 111 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 MIB1Q86YT6 1006 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 LYSMD2Q8IV50 215 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 PHF10Q8WUB8 498 aaKnown RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 TP53INP1Q96A56 240 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 TUBGCP3Q96CW5 907 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 SMOC2Q9H3U7 446 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 SP140LQ9H930 580 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 NEK6Q9HC98 313 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 PAK6Q9NQU5 681 aaPredicted RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 INTS7Q9NVH2 962 aaKnown RBP12.74□□□□□ -0.37
MSH5-204ENST00000375755 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 HS3ST4Q9Y661 456 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
MSH5-204ENST00000375755 A0A1W2PP18 115 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 NOTOA8MTQ0 251 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 CDK14O94921 469 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 SEC24AO95486 1093 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 GNRH1P01148 92 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 GALTP07902 379 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 CDH1P12830 882 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
MSH5-204ENST00000375755 PPP5CP53041 499 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 EEFSECP57772 596 aaKnown RBP12.73□□□□□ -0.37
MSH5-204ENST00000375755 NCS1P62166 190 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 PIK3R6Q5UE93 754 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 FUT10Q6P4F1 479 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 PDZD4Q76G19 769 aaPredicted RBP12.73□□□□□ -0.37
MSH5-204ENST00000375755 RHOXF1Q8NHV9 184 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 EXT2Q93063 718 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 MYEOVQ96EZ4 313 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 LINC00032P0C843 101 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 CCL5P13501 91 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 CASP3P42574 277 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 SERPINB10P48595 397 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 SEPHS1P49903 392 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 COPZ1P61923 177 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 KCNAB2Q13303 367 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
MSH5-204ENST00000375755 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 COQ5Q5HYK3 327 aa12.73□□□□□ -0.37
MSH5-204ENST00000375755 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.73□□□□□ -0.376e-7■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms