RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 LRRC6Q86X45 466 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CILP2Q8IUL8 1156 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 LMNTD2Q8IXW0 634 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 MMGT1Q8N4V1 131 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 DCBLD1Q8N8Z6 715 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 ELMO1Q92556 727 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 TSSK1BQ9BXA7 367 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 COG4Q9H9E3 785 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 POT1Q9NUX5 634 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 KCNK4Q9NYG8 393 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 CHMP2BQ9UQN3 213 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 VPS9D1Q9Y2B5 631 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 TEX264Q9Y6I9 313 aa17.09■□□□□ 0.33
C6orf48-207ENST00000375642 DSPP15924 2871 aaKnown RBP17.09■□□□□ 0.33
C6orf48-207ENST00000375642 A0A1W2PQM1 296 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 UBA6A0AVT1 1052 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 TAF4O00268 1085 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CASC3O15234 703 aaKnown RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 PLTPP55058 493 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 SLC7A5Q01650 507 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 PDIA2Q13087 525 aaKnown RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 RPA4Q13156 261 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 AMZ1Q400G9 498 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 ZNF658BQ4V348 819 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 HSP90AA5PQ58FG0 334 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 XKR5Q6UX68 686 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CENPUQ71F23 418 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 ZNF761Q86XN6 746 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CEP112Q8N8E3 955 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CFAP36Q96G28 342 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 CARD6Q9BX69 1037 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 P2RY12Q9H244 342 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 EPB41L5Q9HCM4 733 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 GNPTGQ9UJJ9 305 aa17.08■□□□□ 0.32
C6orf48-207ENST00000375642 ZFC3H1O60293 1989 aaKnown RBP17.08■□□□□ 0.32
C6orf48-207ENST00000375642 E7ESA3 106 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 LIN7AO14910 233 aaPredicted RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 ITGB6P18564 788 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 RPS3P23396 243 aaKnown RBP eCLIP17.07■□□□□ 0.322e-37■□□□□ 9
C6orf48-207ENST00000375642 PPM1FP49593 454 aaPredicted RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 EIF3BP55884 814 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 GPLD1P80108 840 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 CBLBQ13191 982 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 SYTL3Q4VX76 610 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 CAPRIN2Q6IMN6 1127 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 UNC5AQ6ZN44 842 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 TMEM26Q6ZUK4 368 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 UNC5BQ8IZJ1 945 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 NOA1Q8NC60 698 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 GABPB2Q8TAK5 448 aaPredicted RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 LPGAT1Q92604 370 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 ART4Q93070 314 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 AHCYL2Q96HN2 611 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 C12orf66Q96MD2 445 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 UCK1Q9HA47 277 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 SLC40A1Q9NP59 571 aa17.07■□□□□ 0.32
C6orf48-207ENST00000375642 IMP3Q9NV31 184 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 INTS10Q9NVR2 710 aaKnown RBP17.07■□□□□ 0.32
C6orf48-207ENST00000375642 IGHV1OR21-1A0A087WYE8 117 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 IQCF5A8MTL0 148 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 D6RAR5 112 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 H3BMM5 538 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 IFRD1O00458 451 aaPredicted RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 CPNE6O95741 557 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 S1PR4O95977 384 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 ESR1P03372 595 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 ERVK-10P10266 1014 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 CD1CP29017 333 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 FMO4P31512 558 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 PREPP48147 710 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 ADARP55265 1226 aaKnown RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 PLOD1Q02809 727 aaPredicted RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 GUCY2DQ02846 1103 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 CTBP1Q13363 440 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 BOP1Q14137 746 aaKnown RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 BRD3Q15059 726 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 TRADDQ15628 312 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 CLPPQ16740 277 aaPredicted RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 ISXQ2M1V0 245 aa17.06■□□□□ 0.32
C6orf48-207ENST00000375642 GLE1Q53GS7 698 aaKnown RBP17.06■□□□□ 0.32
C6orf48-207ENST00000375642 USP53Q70EK8 1073 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms