RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 OR1G1P47890 313 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 POLD2P49005 469 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 AIF1P55008 147 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
MCF2L-204ENST00000375608 PTPRRQ15256 657 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
MCF2L-204ENST00000375608 OR13J1Q8NGT2 312 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 NSMCE3Q96MG7 304 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 GDAP2Q9NXN4 497 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 SPATA7Q9P0W8 599 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 ZNF451Q9Y4E5 1061 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 DLGAP1O14490 977 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 ACOX3O15254 700 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 IDH3BO43837 385 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 MLYCDO95822 493 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 MC4RP32245 332 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 RAPSNQ13702 412 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 STX19Q8N4C7 294 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 KRTCAP2Q8N6L1 136 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
MCF2L-204ENST00000375608 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-204ENST00000375608 ZYG11BQ9C0D3 744 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 IMPAD1Q9NX62 359 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 DNAJB9Q9UBS3 223 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 GIT1Q9Y2X7 761 aa13.56□□□□□ -0.24
MCF2L-204ENST00000375608 SLC1A7O00341 560 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 AQP9O43315 295 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 CAPN15O75808 1086 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PABPC1P11940 636 aaKnown RBP13.55□□□□□ -0.24
MCF2L-204ENST00000375608 S100A3P33764 101 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 HCAR3P49019 387 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 AQP6Q13520 282 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 MFSD10Q14728 455 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 TAB1Q15750 504 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 SIX5Q8N196 739 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PIK3C3Q8NEB9 887 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 SLC22A17Q8WUG5 538 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 KATNAL1Q9BW62 490 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 EHD3Q9NZN3 535 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 VAPAQ9P0L0 249 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 GMIPQ9P107 970 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 EFCAB9A8MZ26 197 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 ULK1O75385 1050 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 RPP40O75818 363 aaKnown RBP13.55□□□□□ -0.24
MCF2L-204ENST00000375608 MT-ND2P03891 347 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 POU2F1P14859 743 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 IL12AP29459 219 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 LRRC74AQ0VAA2 488 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PWP1Q13610 501 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 TP53BP2Q13625 1128 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 ZDHHC21Q8IVQ6 265 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 SLC44A2Q8IWA5 706 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PDPRQ8NCN5 879 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 SLC13A3Q8WWT9 602 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 KCTD13Q8WZ19 329 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 ZNF419Q96HQ0 510 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 ALPK1Q96QP1 1244 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
MCF2L-204ENST00000375608 PNMA8CA0A1B0GUJ8 204 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 RGS10O43665 173 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 LCKP06239 509 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 GPR15P49685 360 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 DEFA1P59665 94 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 DEFA3P59666 94 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■□□ 15.2
MCF2L-204ENST00000375608 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 LIX1Q8N485 282 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 CSF3RQ99062 836 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 NUAK2Q9H093 628 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 DCSTAMPQ9H295 470 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 TREX1Q9NSU2 369 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 ST3GAL5Q9UNP4 418 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
MCF2L-204ENST00000375608 AIREO43918 545 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 PGFP49763 221 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
MCF2L-204ENST00000375608 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-204ENST00000375608 SPANXN2Q5MJ10 180 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 SLC22A15Q8IZD6 547 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 CLDN19Q8N6F1 224 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 CHDHQ8NE62 594 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-204ENST00000375608 TANKQ92844 425 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 UBE2FQ969M7 185 aa13.54□□□□□ -0.24
MCF2L-204ENST00000375608 APOL4Q9BPW4 351 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms