RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 DNAJB2P25686 324 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 UBE3AQ05086 875 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 SCAPQ12770 1279 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 TRAP1Q12931 704 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 INAQ16352 499 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 UPP1Q16831 310 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 ZNF648Q5T619 568 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 ZNF621Q6ZSS3 439 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 SZRD1Q7Z422 152 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 VTCN1Q7Z7D3 282 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 RBM23Q86U06 439 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 BBS5Q8N3I7 341 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 UTP15Q8TED0 518 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 KCNN1Q92952 543 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 CIPCQ9C0C6 399 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 CD84Q9UIB8 345 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 ZNF225Q9UK10 706 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 PDE10AQ9Y233 779 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 RASAL1O95294 804 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 MYF6P23409 242 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 GTF2E2P29084 291 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 NKG7Q16617 165 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 AASDHQ4L235 1098 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 PRSS55Q6UWB4 352 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 THAP5Q7Z6K1 395 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 HM13Q8TCT9 377 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 TANKQ92844 425 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 FUBP1Q96AE4 644 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 CSF3RQ99062 836 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 CGREF1Q99674 301 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 TNKS2Q9H2K2 1166 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 RIC8BQ9NVN3 520 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 COMMD8Q9NX08 183 aa11.62□□□□□ -0.55
MCF2L-202ENST00000375597 DNMT3AQ9Y6K1 912 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 RANBP2P49792 3224 aaKnown RBP11.62□□□□□ -0.55
MCF2L-202ENST00000375597 C2orf81A6NN90 581 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 F5H5T6 163 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ACOX3O15254 700 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 FGF10O15520 208 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 FAM20BO75063 409 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ADAM23O75077 832 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ALOX12P18054 663 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 HALP42357 657 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 HK3P52790 923 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 DNAJB13P59910 316 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 FAM214AQ32MH5 1076 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 COLEC12Q5KU26 742 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SULT1C3Q6IMI6 304 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 TBC1D21Q8IYX1 336 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 GPR156Q8NFN8 814 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 PROKR1Q8TCW9 393 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 RORBQ92753 470 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ROPN1LQ96C74 230 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 APOLD1Q96LR9 279 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 EPB41L1Q9H4G0 881 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 PARVBQ9HBI1 364 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 TLR8Q9NR97 1041 aaKnown RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 INIPQ9NRY2 104 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 DNTTP04053 509 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 BCAP31P51572 246 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 OXCT1P55809 520 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 AQP6Q13520 282 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 DAG1Q14118 895 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 IQSEC1Q6DN90 963 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 TMEM179BQ7Z7N9 219 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 AARSD1Q9BTE6 412 aaKnown RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 RNF167Q9H6Y7 350 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SLC6A13Q9NSD5 602 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 FAIMQ9NVQ4 179 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SQORQ9Y6N5 450 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SPEGQ15772 3267 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 RGS5O15539 181 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SLC7A4O43246 635 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 BMP10O95393 424 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 MMP2P08253 660 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 HTR1BP28222 390 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 PCYT1AP49585 367 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 STC1P52823 247 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 BNIP2Q12982 314 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 CTU2Q2VPK5 515 aaKnown RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 TPGS1Q6ZTW0 290 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 ABHD11Q8NFV4 315 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SLC22A17Q8WUG5 538 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 NODALQ96S42 347 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 TPK1Q9H3S4 243 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 MFSD1Q9H3U5 465 aa11.61□□□□□ -0.55
MCF2L-202ENST00000375597 SDR39U1Q9NRG7 319 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 DDX28Q9NUL7 540 aaKnown RBP11.61□□□□□ -0.55
MCF2L-202ENST00000375597 VPS28Q9UK41 221 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms