RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CHRM5P08912 532 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PBX3P40426 434 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 BUD31P41223 144 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GSK3BP49841 420 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 UGT2B15P54855 530 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GALNT2Q10471 571 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CEACAM7Q14002 265 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TGFBIQ15582 683 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 STEAP4Q687X5 459 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ZDHHC21Q8IVQ6 265 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SLC34A3Q8N130 599 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TMIGD2Q96BF3 282 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 NSMCE3Q96MG7 304 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ACBD6Q9BR61 282 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CFAP97Q9P2B7 532 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 STBD1O95210 358 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ALOX5P09917 674 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ELNP15502 786 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SLC6A2P23975 617 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GGT5P36269 586 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SNRPD1P62314 119 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KCNA10Q16322 511 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ARMC8Q8IUR7 673 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SLC13A3Q8WWT9 602 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KCTD13Q8WZ19 329 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TSPAN18Q96SJ8 248 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 HIPK3Q9H422 1215 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PDE4DIPQ5VU43 2346 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 WNK3Q9BYP7 1800 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KRT87PA6NCN2 255 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 HOXA2O43364 376 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SULT2A1Q06520 285 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SOX4Q06945 474 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 NOL9Q5SY16 702 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MBOAT1Q6ZNC8 495 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KIFC1Q9BW19 673 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 NFKBIZQ9BYH8 718 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TPK1Q9H3S4 243 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TALDO1P37837 337 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PTSQ03393 145 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TUSC3Q13454 348 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 QPRTQ15274 297 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 HKDC1Q2TB90 917 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CXorf57Q6NSI4 855 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CENPIQ92674 756 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PPCDCQ96CD2 204 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 IGSF5Q9NSI5 407 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MALT1Q9UDY8 824 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 AP3M1Q9Y2T2 418 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TRAV19A0A0A6YYK7 116 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SDHDO14521 159 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 FAM189A1O60320 539 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CNTN5O94779 1100 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CCL23P55773 120 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 COPZ1P61923 177 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CDKL1Q00532 357 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 IL18R1Q13478 541 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 OR4D1Q15615 310 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 OR52E8Q6IFG1 317 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 COL26A1Q96A83 441 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PAWRQ96IZ0 340 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF778Q96MU6 729 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ACAT2Q9BWD1 397 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MOCS1Q9NZB8 636 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SPATA2Q9UM82 520 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CITO14578 2027 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SLC38A8A6NNN8 435 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 DCLK1O15075 740 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 AIREO43918 545 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KERAO60938 352 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CHRM1P11229 460 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 G6PDP11413 515 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GDF5P43026 501 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SMAD3P84022 425 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MS4A2Q01362 244 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ILF2Q12905 390 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ENPP6Q6UWR7 440 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MTSS1LQ765P7 747 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CYP2U1Q7Z449 544 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SLC22A16Q86VW1 577 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 OR5K1Q8NHB7 308 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MRGPRX2Q96LB1 330 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GPATCH1Q9BRR8 931 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 FNDC11Q9BVV2 318 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TFB2MQ9H5Q4 396 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF221Q9UK13 617 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 EFCAB9A8MZ26 197 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 GABRDO14764 452 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CCL16O15467 120 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PLOD3O60568 738 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MAPK9P45984 424 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RAB14P61106 215 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 BRSK1Q8TDC3 778 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms