RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SOX17Q9H6I2 414 aaPredicted RBP16.68■□□□□ 0.26
PHF1-202ENST00000374516 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 PALMDQ9NP74 551 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 GID8Q9NWU2 228 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 LSM7Q9UK45 103 aaKnown RBP16.68■□□□□ 0.26
PHF1-202ENST00000374516 DNAJC15Q9Y5T4 150 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 SLC30A1Q9Y6M5 507 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 PRRC2BQ5JSZ5 2229 aaKnown RBP16.68■□□□□ 0.26
PHF1-202ENST00000374516 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 GFRA2O00451 464 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 INPP4BO15327 924 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 LATS1O95835 1130 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 CCNA2P20248 432 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 POLR2IP36954 125 aaKnown RBP16.68■□□□□ 0.26
PHF1-202ENST00000374516 STC1P52823 247 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 SH3BP2P78314 561 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■□□□□ 8.8
PHF1-202ENST00000374516 TAF1AQ15573 450 aaPredicted RBP16.68■□□□□ 0.26
PHF1-202ENST00000374516 SLC14A2Q15849 920 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 UNC50Q53HI1 259 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 CCNYL2Q5T2Q4 361 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 NCEH1Q6PIU2 408 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 USP51Q70EK9 711 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 MIER2Q8N344 545 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 GPR150Q8NGU9 434 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 NEURL2Q9BR09 285 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 SLC46A2Q9BY10 475 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 ADGRE3Q9BY15 652 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 GNPTGQ9UJJ9 305 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 CORINQ9Y5Q5 1042 aa16.68■□□□□ 0.26
PHF1-202ENST00000374516 C9JVG2 144 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 J3QRK9 145 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 SULT1C4O75897 302 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 SNAP29O95721 258 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 FGBP02675 491 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 ADH1AP07327 375 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 MAP4P27816 1152 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 GKP32189 559 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 CCR2P41597 374 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 TMBIM6P55061 237 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 CDH13P55290 713 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 GSTM4Q03013 218 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 ATP1A4Q13733 1029 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 ZNF783Q6ZMS7 281 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 SLC15A4Q8N697 577 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 OR13F1Q8NGS4 319 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 TRUB1Q8WWH5 349 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 FBXL8Q96CD0 374 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 RPL10LQ96L21 214 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 GIMAP2Q9UG22 337 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 FKBPLQ9UIM3 349 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 FAM50BQ9Y247 325 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PCDHA9Q9Y5H5 950 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PLXNA4Q9HCM2 1894 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PTPRSQ13332 1948 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 NOL3O60936 208 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 CPNE6O95741 557 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 MTHFD1P11586 935 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 CTPS1P17812 591 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 CHRM3P20309 590 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 FUT4P22083 530 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 CES1P23141 567 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 FMO4P31512 558 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 HTRA4P83105 476 aaPredicted RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 CREMQ03060 361 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 GRB7Q14451 532 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 INO80DQ53TQ3 878 aaPredicted RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 ISCA2Q86U28 154 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PNPT1Q8TCS8 783 aaKnown RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 BADQ92934 168 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 TRIM8Q9BZR9 551 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 ARMC7Q9H6L4 198 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 IFT80Q9P2H3 777 aaPredicted RBP16.67■□□□□ 0.26
PHF1-202ENST00000374516 MAFFQ9ULX9 164 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 PTGDR2Q9Y5Y4 395 aa16.67■□□□□ 0.26
PHF1-202ENST00000374516 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 GPR39O43194 453 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 RFPL2O75678 378 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 ESRRBO95718 433 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 LPOP22079 712 aaPredicted RBP16.66■□□□□ 0.26
PHF1-202ENST00000374516 ADARB1P78563 741 aaKnown RBP16.66■□□□□ 0.26
PHF1-202ENST00000374516 NR1D2Q14995 579 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 ZBTB46Q86UZ6 589 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 PIANPQ8IYJ0 282 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 EXT2Q93063 718 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 C1orf50Q9BV19 199 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 INTS10Q9NVR2 710 aaKnown RBP16.66■□□□□ 0.26
PHF1-202ENST00000374516 POLR3BQ9NW08 1133 aaPredicted RBP16.66■□□□□ 0.26
PHF1-202ENST00000374516 INSL6Q9Y581 213 aa16.66■□□□□ 0.26
PHF1-202ENST00000374516 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
PHF1-202ENST00000374516 TCRBV5S2A0A599 114 aa16.65■□□□□ 0.26
PHF1-202ENST00000374516 LEFTY2O00292 366 aa16.65■□□□□ 0.26
PHF1-202ENST00000374516 PPP6CO00743 305 aa16.65■□□□□ 0.26
PHF1-202ENST00000374516 ADAM23O75077 832 aa16.65■□□□□ 0.26
PHF1-202ENST00000374516 WISP3O95389 354 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms