RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 APOLD1Q96LR9 279 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CHCHD6Q9BRQ6 235 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 WDR55Q9H6Y2 383 aaPredicted RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 UCKL1Q9NWZ5 548 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 SLC17A7Q9P2U7 560 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 MRTO4Q9UKD2 239 aaKnown RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 PCDHGC5Q9Y5F6 944 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 MYBL2P10244 700 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 PDX1P52945 283 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 PRMT2P55345 433 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 TSPAN5P62079 268 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 SMARCD3Q6STE5 483 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 DGLUCYQ7Z3D6 616 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CHERPQ8IWX8 916 aaKnown RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 SH3RF2Q8TEC5 729 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CLPTM1LQ96KA5 538 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 GNEQ9Y223 722 aaKnown RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 COL14A1Q05707 1796 aaKnown RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 RGS10O43665 173 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 FABP3P05413 133 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CHRM5P08912 532 aaPredicted RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 FUT4P22083 530 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 FSHRP23945 695 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 MASP1P48740 699 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 BMT2Q1RMZ1 405 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 ARCQ7LC44 396 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 GHDCQ8N2G8 530 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PARP15Q460N3 678 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 FRMD7Q6ZUT3 714 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PIK3R3Q92569 461 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TRIM64A6NGJ6 449 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 H3BM21 787 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PRMT3O60678 531 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF806P0C7X5 589 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ZMYND11Q15326 602 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 CA9Q16790 459 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 LINGO2Q7L985 606 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 LNX2Q8N448 690 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TNFRSF25Q93038 417 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TSPAN18Q96SJ8 248 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PTPN18Q99952 460 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GKN1Q9NS71 199 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ARL8BQ9NVJ2 186 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TNFRSF11BO00300 401 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ATG13O75143 517 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 UROSP10746 265 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GBE1Q04446 702 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GAD2Q05329 585 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 LIPEQ05469 1076 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GLYATQ6IB77 296 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 SMG9Q9H0W8 520 aaKnown RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TBC1D17Q9HA65 648 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 CCDC177Q9NQR7 707 aaPredicted RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TRAF6Q9Y4K3 522 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 FAM155BO75949 473 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PRNPP04156 253 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 RB1P06400 928 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 PGRP06401 933 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 POU2F1P14859 743 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 LRP10Q7Z4F1 713 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ZCCHC10Q8TBK6 192 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 RDH11Q8TC12 318 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TRIM2Q9C040 744 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 OSBPL2Q9H1P3 480 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ALDH4A1P30038 563 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ECHS1P30084 290 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GRK5P34947 590 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ROR2Q01974 943 aaKnown RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ARHGAP1Q07960 439 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 TLR1Q15399 786 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 MINDY4Q4G0A6 757 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 LRRC38Q5VT99 294 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ZMIZ2Q8NF64 920 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 GTPBP3Q969Y2 492 aaKnown RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
TRAF1-201ENST00000373887 POLMQ9NP87 494 aaPredicted RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 WRAP73Q9P2S5 460 aaPredicted RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 MRPS17Q9Y2R5 130 aaKnown RBP14.14□□□□□ -0.15
TRAF1-201ENST00000373887 ROBO3Q96MS0 1386 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 FAM149AA5PLN7 773 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 RIIAD1A6NNX1 92 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 CSN2P05814 226 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 POLR2JP52435 117 aaKnown RBP14.13□□□□□ -0.15
TRAF1-201ENST00000373887 PPP3R1P63098 170 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 OLR1P78380 273 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 GNA12Q03113 381 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 GRM2Q14416 872 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 PITRM1Q5JRX3 1037 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 GCNT6Q5T4J0 391 aa14.13□□□□□ -0.15
TRAF1-201ENST00000373887 DGCR14Q96DF8 476 aaKnown RBP14.13□□□□□ -0.15
TRAF1-201ENST00000373887 RTKNQ9BST9 563 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms