RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MGAT1P26572 445 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 STXBP1P61764 594 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PEX6Q13608 980 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 RRP1BQ14684 758 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZCCHC23Q6ZST2 131 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 BTBD9Q96Q07 612 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 VNN2O95498 520 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 APOC3P02656 99 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 FAM83HQ6ZRV2 1179 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GIMAP5Q96F15 307 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 NEDD4LQ96PU5 975 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ABCG4Q9H172 646 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 TRPV4Q9HBA0 871 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ANGPT4Q9Y264 503 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 NPPAP01160 153 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PFKPQ01813 784 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ECM1Q16610 540 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 RNF151Q2KHN1 245 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GDF6Q6KF10 455 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SNX20Q7Z614 316 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PAQR7Q86WK9 346 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC9A9Q8IVB4 645 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 WDSUB1Q8N9V3 476 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC37A3Q8NCC5 494 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GMIPQ9P107 970 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PFKMP08237 780 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 UBXN2BQ14CS0 331 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 VWA5B1Q5TIE3 1220 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC16A9Q7RTY1 509 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ATCAYQ86WG3 371 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 COQ8AQ8NI60 647 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PSD2Q9BQI7 771 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZNF69Q9UC07 566 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GABRQQ9UN88 632 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 A0A096LPK6 155 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 TSPAN5P62079 268 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SPIBQ01892 262 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 GFOD2Q3B7J2 385 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 LPCAT4Q643R3 524 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 PMM1Q92871 262 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC47A1Q96FL8 570 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 TEFMQ96QE5 360 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 MYOCQ99972 504 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 FANCFQ9NPI8 374 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ACTL7BQ9Y614 415 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZNF536O15090 1300 aa13.89□□□□□ -0.19
RAPGEF1-202ENST00000372190 LOC100509620A0A075B734 347 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SGTAO43765 313 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 RORCP51449 518 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SEC13P55735 322 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 HES5Q5TA89 166 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 TCEAL6Q6IPX3 200 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 FBXO39Q8N4B4 442 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ACBD4Q8NC06 268 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC22A8Q8TCC7 542 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 DPF1Q92782 380 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 KAT5Q92993 513 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 BRD7Q9NPI1 651 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 GFOD1Q9NXC2 390 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SEC14L4Q9UDX3 406 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 DBIP07108 87 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 CD86P42081 329 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ABRQ12979 859 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SLC25A25Q6KCM7 469 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 CHST15Q7LFX5 561 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 KATNAL2Q8IYT4 538 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 NMRAL1Q9HBL8 299 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 B4GALT4O60513 344 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 C8AP07357 584 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ERVK-21P61565 698 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 SKP1P63208 163 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 COTL1Q14019 142 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 KRBOX4Q5JUW0 171 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 MFSD8Q8NHS3 518 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ERI2A8K979 691 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 ZNF35P13682 527 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 OGNP20774 298 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 DPAGT1Q9H3H5 408 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 POMKQ9H5K3 350 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 PTBP2Q9UKA9 531 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 A0A0U1RQJ8 604 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 GSTT2P0CG29 244 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 VAMP1P23763 118 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 CCNFP41002 786 aa13.88□□□□□ -0.19
RAPGEF1-202ENST00000372190 BMT2Q1RMZ1 405 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms