RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CERKQ8TCT0 537 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 MRPS31Q92665 395 aaKnown RBP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 PCDHGB3Q9Y5G1 929 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 RYKP34925 604 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 CLCA4Q14CN2 919 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 APOBEC3FQ8IUX4 373 aaKnown RBP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 PIWIL1Q96J94 861 aaKnown RBP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 ACSS2Q9NR19 701 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 A0A1B0GV50 99 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 DAPL1A0PJW8 107 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 AGAP5A6NIR3 686 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 CYP3A7P24462 503 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 MIPP30301 263 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 TMEM214Q6NUQ4 689 aaKnown RBP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 C1orf94Q6P1W5 598 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 MOXD1Q6UVY6 613 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 LNX2Q8N448 690 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 HJURPQ8NCD3 748 aaPredicted RBP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 BRSK1Q8TDC3 778 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 TAS1R2Q8TE23 839 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 SGK2Q9HBY8 427 aa15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.13■□□□□ 0.01
GTF3C4-201ENST00000372146 TCRBV9S1A1TA0A576 114 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 SNAP29O95721 258 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 FGBP02675 491 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 GPD2P43304 727 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 RFTN2Q52LD8 501 aaPredicted RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 OR7G2Q8NG99 324 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 GRIN3AQ8TCU5 1115 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 SLC41A3Q96GZ6 507 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 C8orf48Q96LL4 319 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 URADA6NGE7 173 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ZNF616Q08AN1 781 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 MAPK14Q16539 360 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ASB8Q9H765 288 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 IL1RAPQ9NPH3 570 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 FANCFQ9NPI8 374 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ZNF20P17024 532 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 AP2M1Q96CW1 435 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 SPIN1Q9Y657 262 aaPredicted RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 OTOL1A6NHN0 477 aaPredicted RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ALDH3B2P48448 385 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ANTXR2P58335 489 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 DALRD3Q5D0E6 543 aaKnown RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ADAMTSL2Q86TH1 951 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 TERB2Q8NHR7 220 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 C15orf40Q8WUR7 153 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 VCPIP1Q96JH7 1222 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 OTOFQ9HC10 1997 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 AP2A1O95782 977 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 KDELR1P24390 212 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 RAB5CP51148 216 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ATP13A1Q9HD20 1204 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 BOLA2-SMG1P6H3BVE0 249 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 NUDT17P0C025 328 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 ZNF16P17020 682 aaPredicted RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 RNASEH2BQ5TBB1 312 aaKnown RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 METTL25Q8N6Q8 603 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 C2orf69Q8N8R5 385 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 SULT4A1Q9BR01 284 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 FBXO44Q9H4M3 255 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 EDF1O60869 148 aaKnown RBP15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 MTMR4Q9NYA4 1195 aa15.12■□□□□ 0.01
GTF3C4-201ENST00000372146 CASP9P55211 416 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 CRYBG2Q8N1P7 616 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 SLC5A7Q9GZV3 580 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 SPG21Q9NZD8 308 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 ST14Q9Y5Y6 855 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 LIASO43766 372 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 FCER2P06734 321 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 LYPLAL1Q5VWZ2 237 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 RANBP3LQ86VV4 465 aaPredicted RBP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 TKTL2Q9H0I9 626 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 MEAF6Q9HAF1 191 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 PNO1Q9NRX1 252 aaKnown RBP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 CSF2P04141 144 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 SERPINA4P29622 427 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 CPT1AP50416 773 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 BAATQ14032 418 aaPredicted RBP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 PARGQ86W56 976 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 CADM2Q8N3J6 435 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 FBRSQ9HAH7 460 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 H3BSA7 217 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 DNM1LO00429 736 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 HOXD10P28358 340 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 EPHB3P54753 998 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 SLC3A1Q07837 685 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 TARDBPQ13148 414 aaKnown RBP eCLIP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 PUM1Q14671 1186 aaKnown RBP eCLIP15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 CDKAL1Q5VV42 579 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 MPZL3Q6UWV2 235 aa15.11■□□□□ 0.01
GTF3C4-201ENST00000372146 C2orf92A0A1B0GVN3 265 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms