RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 STEAP4Q687X5 459 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 ABRAXAS1Q6UWZ7 409 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 ZNF438Q7Z4V0 828 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 TMEM159Q96B96 161 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 SH3KBP1Q96B97 665 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 C12orf66Q96MD2 445 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 PHACTR1Q9C0D0 580 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 P2RY12Q9H244 342 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 CCDC68Q9H2F9 335 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 EPB41L5Q9HCM4 733 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 KCNK4Q9NYG8 393 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 CRYL1Q9Y2S2 319 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 CFAP20Q9Y6A4 193 aaKnown RBP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 RP1P56715 2156 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 IQCF5A8MTL0 148 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 E5RI56 91 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 H3BMM5 538 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 PPM1DO15297 605 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 ESR1P03372 595 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 F7P08709 466 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 MTHFD1P11586 935 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 FMO4P31512 558 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 MAPK9P45984 424 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 GPR3P46089 330 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 CSE1LP55060 971 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 OR1D5P58170 312 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 MPP1Q00013 466 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 RPA4Q13156 261 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 CLCA4Q14CN2 919 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 RPE65Q16518 533 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 AMZ1Q400G9 498 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 CTSL3PQ5NE16 218 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 DUS1LQ6P1R4 473 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 RBM44Q6ZP01 1051 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 KRT222Q8N1A0 295 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 GSDMBQ8TAX9 411 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 LKAAEAR1Q8TD35 194 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 SEC14L1Q92503 715 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 RMDN2Q96LZ7 410 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 GFM1Q96RP9 751 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 FAM129AQ9BZQ8 928 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 FOXP3Q9BZS1 431 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 LRRN3Q9H3W5 708 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 ZNF624Q9P2J8 865 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 MTRF1LQ9UGC7 380 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 DMGDHQ9UI17 866 aaKnown RBP14.52□□□□□ -0.08
COL9A1-204ENST00000370496 FBXO5Q9UKT4 447 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 CLCA2Q9UQC9 943 aa14.52□□□□□ -0.08
COL9A1-204ENST00000370496 COL27A1Q8IZC6 1860 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-204ENST00000370496 D6RAR5 112 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 DUX1O43812 170 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 NIPSNAP2O75323 286 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 TCEA3O75764 348 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 TOP3BO95985 862 aaKnown RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 APOA4P06727 396 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 JUPP14923 745 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 XRCC1P18887 633 aaPredicted RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 SPINK2P20155 84 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 ADARP55265 1226 aaKnown RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 CCL7P80098 99 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 KRT33BQ14525 404 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 NR1D2Q14995 579 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 PLCL1Q15111 1095 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 TRMT10BQ6PF06 316 aaKnown RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 NAPRTQ6XQN6 538 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 PDZD3Q86UT5 571 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 TMPRSS12Q86WS5 348 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 PALM2Q8IXS6 379 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 RBM12BQ8IXT5 1001 aaKnown RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 OR10G6Q8NH81 332 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 IFT81Q8WYA0 676 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 AHCYL2Q96HN2 611 aaKnown RBP14.51□□□□□ -0.09
COL9A1-204ENST00000370496 DEPDC7Q96QD5 511 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 SCNM1Q9BWG6 230 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 OR52A5Q9H2C5 316 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 L2HGDHQ9H9P8 463 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 PLAC1Q9HBJ0 212 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 ZFATQ9P243 1243 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 KLK13Q9UKR3 277 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 ANGPTL2Q9UKU9 493 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 HEBP2Q9Y5Z4 205 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 ASXL3Q9C0F0 2248 aa14.51□□□□□ -0.09
COL9A1-204ENST00000370496 FAM149AA5PLN7 773 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 LILRA5A6NI73 299 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 CASC3O15234 703 aaKnown RBP14.5□□□□□ -0.09
COL9A1-204ENST00000370496 S1PR4O95977 384 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 MT-CO3P00414 261 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 RHOXF2BP0C7M4 288 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 PKMP14618 531 aaKnown RBP14.5□□□□□ -0.09
COL9A1-204ENST00000370496 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
COL9A1-204ENST00000370496 SLC19A1P41440 591 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 CARSP49589 748 aaKnown RBP14.5□□□□□ -0.09
COL9A1-204ENST00000370496 EPHA4P54764 986 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 GPLD1P80108 840 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 PLOD1Q02809 727 aaPredicted RBP14.5□□□□□ -0.09
COL9A1-204ENST00000370496 HSPA14Q0VDF9 509 aa14.5□□□□□ -0.09
COL9A1-204ENST00000370496 GPR18Q14330 331 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms