RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SIDT1Q9NXL6 827 aaKnown RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 SLC39A1Q9NY26 324 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 FAM8A1Q9UBU6 413 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 EPHA6Q9UF33 1036 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 TCRBV7S3A2A0A539 114 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 TOX3O15405 576 aaPredicted RBP18.51■□□□□ 0.55
CKS1B-203ENST00000368439 ZSCAN12O43309 604 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 AP2A2O94973 939 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 GOT2P00505 430 aaKnown RBP18.51■□□□□ 0.55
CKS1B-203ENST00000368439 POLBP06746 335 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 BASP1P80723 227 aaKnown RBP18.51■□□□□ 0.55
CKS1B-203ENST00000368439 CYP1B1Q16678 543 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 SOWAHCQ53LP3 525 aaPredicted RBP18.51■□□□□ 0.55
CKS1B-203ENST00000368439 TMEM164Q5U3C3 297 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 PACS1Q6VY07 963 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 NLRP9Q7RTR0 991 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 GPR155Q7Z3F1 870 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 FAM129CQ86XR2 697 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 COG1Q8WTW3 980 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 PEX13Q92968 403 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 SGSM3Q96HU1 749 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 C12orf66Q96MD2 445 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 TGM7Q96PF1 710 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 SPRY4Q9C004 299 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 OR52A5Q9H2C5 316 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 FBXO8Q9NRD0 319 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 CHRAC1Q9NRG0 131 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 SMARCAL1Q9NZC9 954 aa18.51■□□□□ 0.55
CKS1B-203ENST00000368439 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
CKS1B-203ENST00000368439 KIF1CO43896 1103 aaKnown RBP18.5■□□□□ 0.55
CKS1B-203ENST00000368439 SLC35G4P0C7Q5 338 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 TPSB2P20231 275 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 NSG1P42857 185 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 MAGEA6P43360 314 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 PPP1CAP62136 330 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 SRSF6Q13247 344 aaKnown RBP18.5■□□□□ 0.55
CKS1B-203ENST00000368439 SEMA3AQ14563 771 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 TPSAB1Q15661 275 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 PCID2Q5JVF3 399 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 ANKS6Q68DC2 871 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 AFTPHQ6ULP2 937 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 PRSS42Q7Z5A4 293 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 ZFPM2Q8WW38 1151 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 AP1M1Q9BXS5 423 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 ZNF768Q9H5H4 540 aaKnown RBP18.5■□□□□ 0.55
CKS1B-203ENST00000368439 TREX1Q9NSU2 369 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 SEMA5BQ9P283 1151 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 SLC24A2Q9UI40 661 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 NEU2Q9Y3R4 380 aa18.5■□□□□ 0.55
CKS1B-203ENST00000368439 ATMQ13315 3056 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 K7ENP7 123 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 PDHA2P29803 388 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 SESN2P58004 480 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 RAB15P59190 212 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 CRADDP78560 199 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 VAC14Q08AM6 782 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 KCNJ11Q14654 390 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 TRIP13Q15645 432 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 ARHGAP40Q5TG30 622 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 INO80CQ6PI98 192 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 PPHLN1Q8NEY8 458 aaKnown RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 OR4L1Q8NH43 312 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 KLHL6Q8WZ60 621 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 CCNL2Q96S94 520 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 OSBPL9Q96SU4 736 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 KIR3DX1Q9H7L2 352 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 APMAPQ9HDC9 416 aa18.49■□□□□ 0.55
CKS1B-203ENST00000368439 TRMT1Q9NXH9 659 aaKnown RBP18.49■□□□□ 0.55
CKS1B-203ENST00000368439 TEX51A0A1B0GUA7 166 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 USP27XA6NNY8 438 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 OR1I1O60431 355 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 KRT14P02533 472 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 GSTM1P09488 218 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 COILP38432 576 aaPredicted RBP18.48■□□□□ 0.55
CKS1B-203ENST00000368439 NPY2RP49146 381 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 CDK16Q00536 496 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 GSTM4Q03013 218 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 RPA4Q13156 261 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 DCAF12Q5T6F0 453 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 LRRC8BQ6P9F7 803 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 ACTRT1Q8TDG2 376 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 MAGOHBQ96A72 148 aaKnown RBP18.48■□□□□ 0.55
CKS1B-203ENST00000368439 ZDHHC12Q96GR4 267 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 CTRCQ99895 268 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 ASPSCR1Q9BZE9 553 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 IL22Q9GZX6 179 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 VPS37BQ9H9H4 285 aa18.48■□□□□ 0.55
CKS1B-203ENST00000368439 OR5K3A6NET4 321 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 STMND1H3BQB6 276 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 PGRMC1O00264 195 aaKnown RBP18.47■□□□□ 0.55
CKS1B-203ENST00000368439 PREPP48147 710 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 CD151P48509 253 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 PLCL1Q15111 1095 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 LYPLAL1Q5VWZ2 237 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 ANKRD22Q5VYY1 191 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 IRGCQ6NXR0 463 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 PCSK4Q6UW60 755 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 CERS6Q6ZMG9 384 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 CCDC81Q6ZN84 652 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms