RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 HOXD4P09016 255 aaPredicted RBP1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 IFIT2P09913 472 aaKnown RBP1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 CKMT2P17540 419 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 MMP12P39900 470 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 MTHFRP42898 656 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 KRT6CP48668 564 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 CDH11P55287 796 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 ZNF805Q5CZA5 627 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 LYSMD4Q5XG99 296 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 NSUN5P2Q63ZY6 315 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 Q6ZRP5 223 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 GSTA5Q7RTV2 222 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 LACC1Q8IV20 430 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 ANKRD13AQ8IZ07 590 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 SVIPQ8NHG7 77 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 NSL1Q96IY1 281 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 CCDC136Q96JN2 1154 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 AGAP4Q96P64 663 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 ZNF700Q9H0M5 742 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 SLITRK2Q9H156 845 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 ATP13A3Q9H7F0 1226 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 TNFRSF19Q9NS68 423 aa1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 TRMT1Q9NXH9 659 aaKnown RBP1.6□□□□□ -2.15
RNU6-238P-201ENST00000363313 CCDC194A0A1B0GVG4 234 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 A0A1W2PQM1 296 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 GPIP06744 558 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 MELTFP08582 738 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 ATP6V1B1P15313 513 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 CYP2A7P20853 494 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 CPOXP36551 454 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 PGM1P36871 562 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 PAX9P55771 341 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 CAMK1Q14012 370 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 POSTNQ15063 836 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 E2F5Q15329 346 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 NFIL3Q16649 462 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 SOWAHCQ53LP3 525 aaPredicted RBP1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 CCSAPQ6IQ19 270 aaPredicted RBP1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 DENND5BQ6ZUT9 1274 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 PHC2Q8IXK0 858 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 ABHD12Q8N2K0 398 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 SUMF1Q8NBK3 374 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 HM13Q8TCT9 377 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 AZIN2Q96A70 460 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 CALML4Q96GE6 196 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 PDLIM5Q96HC4 596 aaKnown RBP1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 KLHL15Q96M94 604 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 MED20Q9H944 212 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 SLC6A13Q9NSD5 602 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 PANK4Q9NVE7 773 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 TEX10Q9NXF1 929 aaPredicted RBP1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 GJD2Q9UKL4 321 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 SLC6A5Q9Y345 797 aa1.59□□□□□ -2.15
RNU6-238P-201ENST00000363313 HCFC1P51610 2035 aa1.59□□□□□ -2.16
RNU6-238P-201ENST00000363313 LOC105371242A0A075B767 164 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 H0Y9J4 135 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 MLYCDO95822 493 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 VTNP04004 478 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 SELLP14151 372 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 PRKACGP22612 351 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 NKX2-1P43699 371 aaPredicted RBP1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 MAPK9P45984 424 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 ARL4CP56559 192 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 MRPS34P82930 218 aaKnown RBP1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 MVPQ14764 893 aaKnown RBP1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 PDLIM3Q53GG5 364 aaPredicted RBP1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 FBXO47Q5MNV8 452 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 ATG16L1Q676U5 607 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 LINGO4Q6UY18 593 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 TPRG1Q6ZUI0 275 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 CEACAM19Q7Z692 300 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 RTN4RL2Q86UN3 420 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 C2CD5Q86YS7 1000 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 RASGEF1CQ8N431 466 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 OR14L1PQ8NHC6 308 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 ACKR4Q9NPB9 350 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 MAU2Q9Y6X3 613 aa1.58□□□□□ -2.16
RNU6-238P-201ENST00000363313 A0A1W2PRG0 241 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 MAP2K7O14733 419 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 DFFBO76075 338 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 GCNT3O95395 438 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 OPRL1P41146 370 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 LEPRP48357 1165 aaKnown RBP1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 ADIPOQQ15848 244 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 COL28A1Q2UY09 1125 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 KLC3Q6P597 504 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 CCBE1Q6UXH8 406 aaPredicted RBP1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 NHLRC1Q6VVB1 395 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 PTAR1Q7Z6K3 402 aaPredicted RBP1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 CCDC13Q8IYE1 715 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 DNAJC22Q8N4W6 341 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 OR4C3Q8NH37 302 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 KCNG4Q8TDN1 519 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 RILPL2Q969X0 211 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 ZIM3Q96PE6 472 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 MYADMQ96S97 322 aa1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 SEPT5Q99719 369 aaPredicted RBP1.57□□□□□ -2.16
RNU6-238P-201ENST00000363313 FUZQ9BT04 418 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms