RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KATNAL1Q9BW62 490 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ELOVL6Q9H5J4 265 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TFB2MQ9H5Q4 396 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SDR39U1Q9NRG7 319 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 GNPTGQ9UJJ9 305 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TPRKBQ9Y3C4 175 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF99A8MXY4 864 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NT5C1B-RDH14C9J2C7 533 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 GABRDO14764 452 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RAD51BO15315 384 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 BCAS1O75363 584 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 PGLSO95336 258 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MAGEA8P43361 318 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CD97P48960 835 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 DGKEP52429 567 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 STC1P52823 247 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NCS1P62166 190 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RPS24P62847 133 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MRPS6P82932 125 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CD47Q08722 323 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TRAF3Q13114 568 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NPTX1Q15818 432 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF792Q3KQV3 632 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 COLEC12Q5KU26 742 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 FAM171A1Q5VUB5 890 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SMYD5Q6GMV2 418 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ELMSAN1Q6PJG2 1045 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 AFTPHQ6ULP2 937 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 P2RY8Q86VZ1 359 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 DENND1CQ8IV53 801 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CCDC117Q8IWD4 279 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CNTN4Q8IWV2 1026 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CARNMT1Q8N4J0 409 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KRTCAP2Q8N6L1 136 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 OR4F6Q8NGB9 312 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC13A3Q8WWT9 602 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 STON2Q8WXE9 905 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 UBXN10Q96LJ8 280 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NSMCE3Q96MG7 304 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ACBD6Q9BR61 282 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 BBS2Q9BXC9 721 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 AIG1Q9NVV5 245 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 GIN1Q9NXP7 522 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ERVK-18Q9QC07 812 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF490Q9ULM2 529 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SAMHD1Q9Y3Z3 626 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZFC3H1O60293 1989 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 LOC100130705A0A1B0GUX0 176 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 FXYD1O00168 92 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RGS14O43566 566 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MYO1DO94832 1006 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KRT75O95678 551 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NDST3O95803 873 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 APOA1P02647 267 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 COL6A1P12109 1028 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TCF3P15923 654 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 LPOP22079 712 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 LRRC74AQ0VAA2 488 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SKIV2LQ15477 1246 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MS4A13Q5J8X5 152 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MSANTD2Q6P1R3 559 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KDELC1Q6UW63 502 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 HACD2Q6Y1H2 254 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SZRD1Q7Z422 152 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 BTLAQ7Z6A9 289 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MON1AQ86VX9 555 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC44A2Q8IWA5 706 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 LEMD2Q8NC56 503 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZFP90Q8TF47 636 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SELENOMQ8WWX9 145 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KIAA1191Q96A73 305 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 PPP1R14BQ96C90 147 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RBM4BQ9BQ04 359 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RBM4Q9BWF3 364 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 NSUN3Q9H649 340 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 USE1Q9NZ43 259 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 PDP1Q9P0J1 537 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 UTS2RQ9UKP6 389 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TRPV2Q9Y5S1 764 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PSMD11O00231 422 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 CYP7B1O75881 506 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ADRA1AP35348 466 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ATP4BP51164 291 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 KCNQ1P51787 676 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 NEK2P51955 445 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 GTF2H2Q13888 395 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 UGT3A2Q3SY77 523 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PSAPL1Q6NUJ1 521 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 NIPAL1Q6NVV3 410 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 GTF2H2CQ6P1K8 395 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM53Q6P2H8 277 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ALKAL1Q6UXT8 129 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 HS6ST3Q8IZP7 471 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 OR52J3Q8NH60 311 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 IRGQQ8WZA9 623 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 L3HYPDHQ96EM0 354 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms