RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CNTFP26441 200 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 RPL10P27635 214 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 AOAHP28039 575 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 SLCO1A2P46721 670 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 PREPP48147 710 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 POU4F1Q01851 419 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 USP10Q14694 798 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 DEFB133Q30KQ1 61 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 TTLL9Q3SXZ7 439 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 FAM83HQ6ZRV2 1179 aaPredicted RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 PIM3Q86V86 326 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 NRROSQ86YC3 692 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 ZBTB2Q8N680 514 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 SIDT2Q8NBJ9 832 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 FAM46DQ8NEK8 389 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 EPS8L3Q8TE67 593 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 SAP25Q8TEE9 199 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 RXFP3Q9NSD7 469 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 DNAAF2Q9NVR5 837 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 CSNK1G3Q9Y6M4 447 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 PCDHGA12O60330 932 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 KRT37O76014 449 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 SLC35G4P0C7Q5 338 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 ZNF883P0CG24 379 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 TGM1P22735 817 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 GCAP28676 217 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 SKIV2L2P42285 1042 aaKnown RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 CLCN7P51798 805 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 CLCNKAP51800 687 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 PLOD1Q02809 727 aaPredicted RBP14.95□□□□□ -0.02
TPM1-206ENST00000358278 LGSNQ5TDP6 509 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 METRNLQ641Q3 311 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 ADGRD1Q6QNK2 874 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 SLC25A45Q8N413 288 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 ACVR1CQ8NER5 493 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 CD200R1Q8TD46 325 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 TSPAN17Q96FV3 270 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 OLFM1Q99784 485 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 DHRS4Q9BTZ2 278 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 CAB39LQ9H9S4 337 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 GALPQ9UBC7 116 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 TBC1D29Q9UFV1 150 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 TBK1Q9UHD2 729 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 ACSL5Q9ULC5 683 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 PSMD13Q9UNM6 376 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 MED16Q9Y2X0 877 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 DHRS7Q9Y394 339 aa14.95□□□□□ -0.02
TPM1-206ENST00000358278 CFAP54Q96N23 3096 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 IQANK1A0A1B0GTG1 560 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 B4DGG1 531 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 RASGRF2O14827 1237 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 YY2O15391 372 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 ALPPL2P10696 532 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 STMN1P16949 149 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 TAS2R39P59534 338 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 RPA4Q13156 261 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 SUZ12Q15022 739 aaKnown RBP14.94□□□□□ -0.02
TPM1-206ENST00000358278 ZNF658BQ4V348 819 aaPredicted RBP14.94□□□□□ -0.02
TPM1-206ENST00000358278 PLEKHS1Q5SXH7 462 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 GIMAP7Q8NHV1 300 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 SKA2Q8WVK7 121 aaPredicted RBP14.94□□□□□ -0.02
TPM1-206ENST00000358278 INPP5DQ92835 1189 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 SLC30A3Q99726 388 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 PRDM8Q9NQV8 689 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 CTNNAL1Q9UBT7 734 aa14.94□□□□□ -0.02
TPM1-206ENST00000358278 TSR3Q9UJK0 312 aaKnown RBP14.94□□□□□ -0.02
TPM1-206ENST00000358278 SLC5A10A0PJK1 596 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 TLDC2A0PJX2 215 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 PRR19A6NJB7 356 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 CDX4O14627 284 aaPredicted RBP14.93□□□□□ -0.02
TPM1-206ENST00000358278 GFRA3O60609 400 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 CDH16O75309 829 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 F3P13726 295 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 CD9P21926 228 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 HALP42357 657 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 SERPINB8P50452 374 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 PGGT1BP53609 377 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 TIAL1Q01085 375 aaKnown RBP eCLIP14.93□□□□□ -0.029e-7■■■□□ 18.9
TPM1-206ENST00000358278 ZNF460Q14592 562 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 INAVAQ3KP66 663 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 UAP1L1Q3KQV9 507 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 RAPH1Q70E73 1250 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 ZDHHC1Q8WTX9 485 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 GLMNQ92990 594 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 DUSP23Q9BVJ7 150 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 LATS2Q9NRM7 1088 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 NLGN3Q9NZ94 848 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 SIRPGQ9P1W8 387 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 KLHL42Q9P2K6 505 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 RP1P56715 2156 aa14.93□□□□□ -0.02
TPM1-206ENST00000358278 TRIM49D1C9J1S8 452 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 IFRD1O00458 451 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 TPP1O14773 563 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 PHGDHO43175 533 aaKnown RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 GPC4O75487 556 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 TCEA3O75764 348 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 SNRPAP09012 282 aaKnown RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 SLC2A4P14672 509 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms