RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ATCAYQ86WG3 371 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 OR8K3Q8NH51 312 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 DGAT2Q96PD7 388 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 FUT8Q9BYC5 575 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 GANQ9H2C0 597 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 CAMSAP1Q5T5Y3 1602 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 H3BMM5 538 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 INSIG1O15503 277 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 NDUFS4O43181 175 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RPL14P50914 215 aaKnown RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ECT2LQ008S8 904 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RPL6Q02878 288 aaKnown RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 IL18Q14116 193 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PON2Q15165 354 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 NAIF1Q69YI7 327 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 DNAJC19Q96DA6 116 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 BEX2Q9BXY8 128 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 BEX1Q9HBH7 125 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 GIMAP2Q9UG22 337 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PHF11Q9UIL8 331 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 CLDN4O14493 209 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PDE9AO76083 593 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 CTSKP43235 329 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 NFKB2Q00653 900 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 SLC25A52Q3SY17 297 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 KIAA1161Q6NSJ0 714 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 OR8K5Q8NH50 307 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 TEX47Q8TBZ9 253 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ASB12Q8WXK4 309 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 IL17FQ96PD4 163 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 CREBZFQ9NS37 354 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF226Q9NYT6 803 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 TAC3Q9UHF0 121 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 MBD5Q9P267 1494 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 WASH3PC4AMC7 463 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 APOL3O95236 402 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 AOC1P19801 751 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ARL3P36405 182 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 IFNGR2P38484 337 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 OGDHQ02218 1023 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 EMC10Q5UCC4 262 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 C9orf135Q5VTT2 229 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 LBX2Q6XYB7 198 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 FAM92BQ6ZTR7 304 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ARMC10Q8N2F6 343 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RASGEF1AQ8N9B8 481 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 TXNDC5Q8NBS9 432 aaKnown RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PPTC7Q8NI37 304 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PCDHAC1Q9H158 963 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 PDZD7Q9H5P4 517 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RC3H2Q9HBD1 1191 aaKnown RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 R3HDM2Q9Y2K5 976 aaKnown RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 DDX6P26196 483 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF135P52742 658 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RUNDC3AQ59EK9 446 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 FAM131AQ6UXB0 335 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 RBFAQ8N0V3 343 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 GLOD4Q9HC38 313 aa7.26□□□□□ -1.25
VPS13A-202ENST00000357409 A0A0D9SEW6 157 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 CXCR1P25024 350 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 PDE12Q6L8Q7 609 aaKnown RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ECHDC2Q86YB7 292 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ACE2Q9BYF1 805 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 TMEM216Q9P0N5 145 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 DNMT1P26358 1616 aaKnown RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 TTC34A8MYJ7 566 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 CNTN5O94779 1100 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 TYRP14679 529 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 MSLNQ13421 630 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 PRRT3Q5FWE3 981 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 C6orf52Q5T4I8 152 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 NPAS4Q8IUM7 802 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 TTC29Q8NA56 475 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 VAT1Q99536 393 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 KLHL31Q9H511 634 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 RGS17Q9UGC6 210 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ACTL7BQ9Y614 415 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 DOK2O60496 412 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 RSL1D1O76021 490 aaKnown RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 PRKD3O94806 890 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 KLF8O95600 359 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-202ENST00000357409 PGAM2P15259 253 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 NR2C2P49116 596 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 FCHO2Q0JRZ9 810 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 FAM110CQ1W6H9 321 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 TEX44Q53QW1 395 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 LY6G5CQ5SRR4 150 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF567Q8N184 647 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 KCNMB3Q9NPA1 279 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 AP4S1Q9Y587 144 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ATG13O75143 517 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 CLEC3AO75596 197 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 FAM58BPP0C7Q3 252 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF823P16415 610 aa7.25□□□□□ -1.25
VPS13A-202ENST00000357409 GDF10P55107 478 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms