RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 DCCP43146 1447 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 NID2Q14112 1375 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 GRM6O15303 877 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 NDST2P52849 883 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 CHIT1Q13231 466 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 ZNF460Q14592 562 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PDCD4Q53EL6 469 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 PLEKHG4Q58EX7 1191 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 ANKRD46Q86W74 232 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 TMC8Q8IU68 726 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PDZD7Q9H5P4 517 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 COQ4Q9Y3A0 265 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PRAMEF33A0A0G2JMD5 474 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PRAMEF10O60809 474 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 NME6O75414 186 aaPredicted RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 CD247P20963 164 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 ACADLP28330 430 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 RPS14P62263 151 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 THOC7Q6I9Y2 204 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 TRNT1Q96Q11 434 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 DTLQ9NZJ0 730 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 A0A1W2PQ72 361 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PRODHO43272 600 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 TPD52L2O43399 206 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 CDK14O94921 469 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 GLUD2P49448 558 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 OXSMQ9NWU1 459 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 MRTO4Q9UKD2 239 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 MRPS23Q9Y3D9 190 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 GRIP1Q9Y3R0 1128 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 COL5A2P05997 1499 aaPredicted RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 GNRH1P01148 92 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CDH1P12830 882 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 PTGER3P43115 390 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 PLEKHG6Q3KR16 790 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 HSDL1Q3SXM5 330 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 BRSK1Q8TDC3 778 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 DCAKDQ8WVC6 231 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 NMUR1Q9HB89 426 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 APOBEC3GQ9HC16 384 aaKnown RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 PPIEQ9UNP9 301 aaKnown RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 CCL22O00626 93 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 PMM2O15305 246 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 GADD45GO95257 159 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 C8BP07358 591 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CYP3A5P20815 502 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 RORCP51449 518 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 MTPNP58546 118 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 HBEGFQ99075 208 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 MAGEH1Q9H213 219 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 DPY19L1Q2PZI1 675 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CRTC2Q53ET0 693 aaPredicted RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 KLHL22Q53GT1 634 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 UFD1Q92890 307 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 PAK6Q9NQU5 681 aaPredicted RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 IMP3Q9NV31 184 aaKnown RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 TBC1D24Q9ULP9 559 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 RBM7Q9Y580 266 aaKnown RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 OR14I1A6ND48 311 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 YAP1P46937 504 aaKnown RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 OR2B6P58173 313 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 ERVK-8P63133 956 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 ZNF563Q8TA94 476 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CALML5Q9NZT1 146 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 EVLQ9UI08 416 aaPredicted RBP14.65□□□□□ -0.06
CHD4-201ENST00000357008 HCN1O60741 890 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 UGT2B4P06133 528 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 ADH1AP07327 375 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CD36P16671 472 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CKMT2P17540 419 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 ARPC4P59998 168 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 GNA12Q03113 381 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 RBBP4Q09028 425 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 C11orf16Q9NQ32 467 aa14.65□□□□□ -0.06
CHD4-201ENST00000357008 CACNB4O00305 520 aaPredicted RBP14.64□□□□□ -0.07
CHD4-201ENST00000357008 GABRDO14764 452 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 ANXA8P13928 327 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 ITPKBP27987 946 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 MAPK12P53778 367 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 VBP1P61758 197 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 RUNDC3AQ59EK9 446 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 EXOSC8Q96B26 276 aaKnown RBP14.64□□□□□ -0.07
CHD4-201ENST00000357008 CEP295NLQ96MC4 621 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 C1orf21Q9H246 121 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 TFB2MQ9H5Q4 396 aaKnown RBP14.64□□□□□ -0.07
CHD4-201ENST00000357008 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 IGLV3-22A0A075B6J6 115 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 RBM47A0AV96 593 aaKnown RBP14.64□□□□□ -0.07
CHD4-201ENST00000357008 KLF11O14901 512 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 INSIG1O15503 277 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 MSCO60682 206 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 POU2F1P14859 743 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 SLC1A2P43004 574 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 DUSP4Q13115 394 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 MAP2K5Q13163 448 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 MADCAM1Q13477 382 aa14.64□□□□□ -0.07
CHD4-201ENST00000357008 ANO7Q6IWH7 933 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms