RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MUSKO15146 869 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ASGR1P07306 291 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 HCKP08631 526 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 SPDYCQ5MJ68 293 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 TCEANCQ8N8B7 351 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 NSMCE3Q96MG7 304 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF717Q9BY31 904 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 GLYATL1P3A0A0U1RQE8 302 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 C13orf42A0A1B0GVH6 325 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 CAPN14A8MX76 684 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 NME6O75414 186 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 MAU2Q9Y6X3 613 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 PRLRP16471 622 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 SYN1P17600 705 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ADRA1DP25100 572 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 CELF3Q5SZQ8 465 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 IFT27Q9BW83 186 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 LRTM1Q9HBL6 345 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 MRPS30Q9NP92 439 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 FADS2P1A8MWK0 482 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 SHOX2O60902 331 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 KLK3P07288 261 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 TAF10Q12962 218 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF782Q6ZMW2 699 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 GSKIPQ9P0R6 139 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 CFAP20Q9Y6A4 193 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 OR4Q2P0C623 313 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ETS2P15036 469 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 PSME3P61289 254 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 PLGLAQ15195 96 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 NLGN4XQ8N0W4 816 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 LGR4Q9BXB1 951 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 NOL11Q9H8H0 719 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 FANCFQ9NPI8 374 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 IDO1P14902 403 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 GCNT6Q5T4J0 391 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 RBM44Q6ZP01 1051 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 KLHL6Q8WZ60 621 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 NCSTNQ92542 709 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 SNRNP25Q9BV90 132 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 SLC5A7Q9GZV3 580 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ANKZF1Q9H8Y5 726 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 IRGMA1A4Y4 181 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CD2P06729 351 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 AADACL4Q5VUY2 407 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CAND1Q86VP6 1230 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PIWIL2Q8TC59 973 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 RCN3Q96D15 328 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 NINJ2Q9NZG7 142 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 SCDO00767 359 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TRAFD1O14545 582 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 COX4I1P13073 169 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CXCR1P25024 350 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 HSPA7P48741 367 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 SEMA3AQ14563 771 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 LSM14AQ8ND56 463 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 MRM3Q9HC36 420 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TECPR2O15040 1411 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 A0A0J9YYE9 177 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 hCG_1807616A0A1W2PRN6 198 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM150CB9EJG8 249 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 M0R129 80 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 BRCC3P46736 316 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM220Q6QAJ8 160 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM151BQ8IW70 566 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF709Q8N972 641 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PIGXQ8TBF5 258 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 B3GALT6Q96L58 329 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PCM1Q15154 2024 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 NADKO95544 446 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 GADD45AP24522 165 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 IGFBP5P24593 272 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 RPIAP49247 311 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CDH11P55287 796 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PROKR2Q8NFJ6 384 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PDCD2LQ9BRP1 358 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CABYRO75952 493 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ACRP10323 421 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PTNP21246 168 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ITGA7Q13683 1181 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 NKAPLQ5M9Q1 402 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM192Q8IY95 271 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF527Q8NB42 609 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PIWIL1Q96J94 861 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 FUT8Q9BYC5 575 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 AGO3Q9H9G7 860 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TNFRSF11BO00300 401 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 WFS1O76024 890 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 CDH4P55283 916 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms