RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 RANBP1P43487 201 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ERVPABLB-1P60509 514 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 NAA20P61599 178 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PTK2BQ14289 1009 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PDK3Q15120 406 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PARP6Q2NL67 630 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CFAP61Q8NHU2 1237 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DEPTORQ8TB45 409 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 P3H4Q92791 437 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 SYT3Q9BQG1 590 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 AICDAQ9GZX7 198 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TRPV5Q9NQA5 729 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 HCFC1R1Q9NWW0 138 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GGA2Q9UJY4 613 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 HCN4Q9Y3Q4 1203 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 A8MXQ7 604 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 NOP56O00567 594 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 EOMESO95936 686 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 LCKP06239 509 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CYP4B1P13584 511 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TKTL1P51854 596 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 SLC12A2P55011 1212 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GPM6BQ13491 265 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GRM2Q14416 872 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ADPRMQ3LIE5 342 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TIGD2Q4W5G0 525 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 MANEALQ5VSG8 457 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DESI1Q6ICB0 168 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FAM124AQ86V42 546 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 SPATA24Q86W54 205 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DTX1Q86Y01 620 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CROCCP3Q8IVE0 287 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CLIP4Q8N3C7 705 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 EIF1ADQ8N9N8 165 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 PPFIBP2Q8ND30 876 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 SCAMP4Q969E2 229 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 MPP4Q96JB8 637 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FCRL2Q96LA5 508 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 FCRL4Q96PJ5 515 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PRKAG2Q9UGJ0 569 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 HS3ST4Q9Y661 456 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PMM2O15305 246 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 SGTAO43765 313 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GREM1O60565 184 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 LALBAP00709 142 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 NUDT6P53370 316 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ADARP55265 1226 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 VLDLRP98155 873 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DGKKQ5KSL6 1271 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DLEU7Q6UYE1 221 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ENOSF1Q7L5Y1 443 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ADGRG5Q8IZF4 528 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 URGCPQ8TCY9 931 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ZFP90Q8TF47 636 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ATP6V0A1Q93050 837 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 NSL1Q96IY1 281 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 RILPQ96NA2 401 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ANKEF1Q9NU02 776 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FNIP2Q9P278 1114 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CD207Q9UJ71 328 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 KPNA7A9QM74 516 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TPST2O60704 377 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CTSAP10619 480 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PORP16435 677 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 ATF6P18850 670 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GPX3P22352 226 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 HARS2P49590 506 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 EIF3BP55884 814 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 HOXC5Q00444 222 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 MC1RQ01726 317 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 ADRM1Q16186 407 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TMEM259Q4ZIN3 620 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 MFSD12Q6NUT3 480 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 MPZL3Q6UWV2 235 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 GPR149Q86SP6 731 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FAM83FQ8NEG4 500 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 SERPINB11Q96P15 392 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 TBCDQ9BTW9 1192 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CTPS2Q9NRF8 586 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DDX43Q9NXZ2 648 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 SEL1LQ9UBV2 794 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 ITM2BQ9Y287 266 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PCDHGA3Q9Y5H0 932 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 C4orf51C9J302 202 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SMIM24O75264 130 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 MT-ND3P03897 115 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ALDH2P05091 517 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 OR12D1P0DN82 309 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TFPIP10646 304 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PTHLHP12272 177 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 GP2P55259 537 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 MEF2AQ02078 507 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 GAB4Q2WGN9 574 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms