RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FBXL19Q6PCT2 694 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 FRA10AC1Q70Z53 315 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 ZNF366Q8N895 744 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 NUS1Q96E22 293 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 COX14Q96I36 57 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.9■□□□□ 0.38e-7■■■■■ 30.9
VPS13B-201ENST00000355155 CD84Q9UIB8 345 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 OR7A17O14581 309 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 TSPAN6O43657 245 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 WDR47O94967 919 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 C6P13671 934 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 NCF2P19878 526 aaPredicted RBP16.9■□□□□ 0.3
VPS13B-201ENST00000355155 DRD3P35462 400 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 CDH13P55290 713 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 AP1S2P56377 157 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 C2orf27AQ580R0 203 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 GPRIN3Q6ZVF9 776 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 GOLGA7Q7Z5G4 137 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 EXT2Q93063 718 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 SHCBP1LQ9BZQ2 653 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 MBD1Q9UIS9 605 aaPredicted RBP16.9■□□□□ 0.3
VPS13B-201ENST00000355155 C17orf113A0A1B0GUU1 675 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 PSIP1O75475 530 aaKnown RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 C5AR1P21730 350 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 SLC6A12P48065 614 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 ACOX1Q15067 660 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 GGTA1PQ4G0N0 100 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 LRRC70Q7Z2Q7 622 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 SPATA19Q7Z5L4 167 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 RASGEF1AQ8N9B8 481 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 AGR3Q8TD06 166 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 EZH1Q92800 747 aaPredicted RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 TRPS1Q9UHF7 1281 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 ASB1Q9Y576 335 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 NPIPB8E9PQR5 432 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 PPP6CO00743 305 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 VEGFDO43915 354 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 TRAF3Q13114 568 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 PHKG1Q16816 387 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 XKR5Q6UX68 686 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 TSPEARQ8WU66 669 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 ASZ1Q8WWH4 475 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 ZNF514Q96K75 400 aaPredicted RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 CCM2Q9BSQ5 444 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 ZCCHC2Q9C0B9 1178 aaKnown RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 UTP6Q9NYH9 597 aaKnown RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 EIF2B4Q9UI10 523 aaKnown RBP16.89■□□□□ 0.29
VPS13B-201ENST00000355155 GPR34Q9UPC5 381 aa16.89■□□□□ 0.29
VPS13B-201ENST00000355155 RECQL5O94762 991 aaPredicted RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 HNRNPH1P31943 449 aaKnown RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 GALK1P51570 392 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 FOXA1P55317 472 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 GTF2H2Q13888 395 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 MAPRE2Q15555 327 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 GSTA3Q16772 222 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 AGBL4Q5VU57 503 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 GTF2H2CQ6P1K8 395 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 MAGEB10Q96LZ2 347 aaPredicted RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 C3orf30Q96M34 536 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 P2RY13Q9BPV8 354 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 RPP25Q9BUL9 199 aaKnown RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 DYRK4Q9NR20 520 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 PDE10AQ9Y233 779 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 K7EPI3 171 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 CCNT2O60583 730 aaKnown RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 OTCP00480 354 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 TMEM115Q12893 351 aaPredicted RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 CLEC6AQ6EIG7 209 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 HACD2Q6Y1H2 254 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 SLC22A15Q8IZD6 547 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 DNASE1L2Q92874 299 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 NDE1Q9NXR1 346 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 A0A1B0GTL3 188 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 CCDC85CA6NKD9 419 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 NEMP1O14524 444 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 ATG13O75143 517 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 ITGB6P18564 788 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 PSMD8P48556 350 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 ERVPABLB-1P60509 514 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 PLOD1Q02809 727 aaPredicted RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 FBXL8Q96CD0 374 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 ACOX2Q99424 681 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 SLC29A3Q9BZD2 475 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
VPS13B-201ENST00000355155 PRPF19Q9UMS4 504 aaKnown RBP16.88■□□□□ 0.29
VPS13B-201ENST00000355155 PIP5K1BO14986 540 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms