RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RPL10P27635 214 aaKnown RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 SOX5P35711 763 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 VAV2P52735 878 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 POLR2FP61218 127 aaKnown RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 OGDHQ02218 1023 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 GPR18Q14330 331 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 NAA25Q14CX7 972 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ZXDCQ2QGD7 858 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 ERMARDQ5T6L9 678 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 MARC1Q5VT66 337 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 LYPLAL1Q5VWZ2 237 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 NLRP8Q86W28 1048 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 PHF13Q86YI8 300 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 ATPAF2Q8N5M1 289 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ZNF514Q96K75 400 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 TSGA10Q9BZW7 698 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 CARD9Q9H257 536 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 FGF21Q9NSA1 209 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 FAM207AQ9NSI2 230 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 POT1Q9NUX5 634 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ATXN10Q9UBB4 475 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 OSGIN2Q9Y236 505 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 B3GNT3Q9Y2A9 372 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 TTLL3Q9Y4R7 772 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 A0A0J9YYE9 177 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 OR52A4PA6NMU1 304 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 TRBC1P01850 177 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 KLK3P07288 261 aaPredicted RBP10.96□□□□□ -0.65
RTN3-204ENST00000354497 CCT5P48643 541 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 KLK7P49862 253 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 DRG2P55039 364 aaKnown RBP10.96□□□□□ -0.65
RTN3-204ENST00000354497 RRADP55042 308 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 NAP1L1P55209 391 aaKnown RBP10.96□□□□□ -0.65
RTN3-204ENST00000354497 CUL3Q13618 768 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 ATP1A4Q13733 1029 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 BLMHQ13867 455 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 GPR19Q15760 415 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 CAMK4Q16566 473 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 STX1AQ16623 288 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 VWA5B1Q5TIE3 1220 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 ALS2CLQ60I27 953 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 MON1BQ7L1V2 547 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 AOPEPQ8N6M6 819 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 LPCAT1Q8NF37 534 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 FAM76AQ8TAV0 307 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 FCRL4Q96PJ5 515 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 PEBP4Q96S96 227 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 SMAD5Q99717 465 aaKnown RBP10.96□□□□□ -0.65
RTN3-204ENST00000354497 GORASP1Q9BQQ3 440 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 GANQ9H2C0 597 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 FAM83DQ9H4H8 585 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
RTN3-204ENST00000354497 PKD2L2Q9NZM6 624 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 SLC23A2Q9UGH3 650 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 DNPEPQ9ULA0 475 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 CHKBQ9Y259 395 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 PPIL1Q9Y3C6 166 aa10.96□□□□□ -0.65
RTN3-204ENST00000354497 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.66
RTN3-204ENST00000354497 C1orf232A0A0U1RR37 186 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 UBA6A0AVT1 1052 aaPredicted RBP10.95□□□□□ -0.66
RTN3-204ENST00000354497 DDX3YO15523 660 aaKnown RBP10.95□□□□□ -0.66
RTN3-204ENST00000354497 PRPSAP2O60256 369 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 ZG16O60844 167 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 RNF8O76064 485 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 SYF2O95926 243 aaKnown RBP10.95□□□□□ -0.66
RTN3-204ENST00000354497 PEX11BO96011 259 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 OTX2P32243 289 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 CCNG1P51959 295 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 XRCC4Q13426 336 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 PLCL1Q15111 1095 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 RALGPS1Q5JS13 557 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 ZNF569Q5MCW4 686 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 IZUMO3Q5VZ72 239 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 LCN10Q6JVE6 187 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 MED25Q71SY5 747 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 TMEM102Q8N9M5 508 aaPredicted RBP10.95□□□□□ -0.66
RTN3-204ENST00000354497 SMYD1Q8NB12 490 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 CLIP3Q96DZ5 547 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 SLC41A2Q96JW4 573 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 WDR24Q96S15 920 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 MAP3K3Q99759 626 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 ARPC5LQ9BPX5 153 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 SPATA16Q9BXB7 569 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 ANKZF1Q9H8Y5 726 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 ZWILCHQ9H900 591 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
RTN3-204ENST00000354497 AGPAT4Q9NRZ5 378 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 TAB2Q9NYJ8 693 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 TCFL5Q9UL49 500 aa10.95□□□□□ -0.66
RTN3-204ENST00000354497 TCRBV5S1A1TA0A578 114 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 H3BRJ5 948 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 FZD6O60353 706 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 MAFKO60675 156 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms