RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZNF280DQ6N043 979 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 B3GNT8Q7Z7M8 397 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ADAMTSL2Q86TH1 951 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HORMAD1Q86X24 394 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HID1Q8IV36 788 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 DTWD1Q8N5C7 304 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 LSMEM1Q8N8F7 131 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PSD4Q8NDX1 1056 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 OR5K1Q8NHB7 308 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CNIH3Q8TBE1 160 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 RNF170Q96K19 258 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GAD1Q99259 594 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 COLEC11Q9BWP8 271 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 C12orf10Q9HB07 376 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GLOD4Q9HC38 313 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TMPRSS4Q9NRS4 437 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 AIG1Q9NVV5 245 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SCN3BQ9NY72 215 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FNIP2Q9P278 1114 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 UBA2Q9UBT2 640 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GIMAP2Q9UG22 337 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 KCNN3Q9UGI6 736 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 MKLN1Q9UL63 735 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 KCNH4Q9UQ05 1017 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 OTOFQ9HC10 1997 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 OR2A25A4D2G3 310 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 B8ZZF3 427 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 H3BMM5 538 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 H3BRB1 525 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 AZIN1O14977 448 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 NOBOXO60393 691 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 CDK14O94921 469 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 PAPSS2O95340 614 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 CST1P01037 141 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 CD36P16671 472 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 ALOX12P18054 663 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 HSPA14Q0VDF9 509 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 MARCH8Q5T0T0 291 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM219BQ5XKK7 198 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 DENND5AQ6IQ26 1287 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 PAQR9Q6ZVX9 377 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 SPATC1Q76KD6 591 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 AMER2Q8N7J2 671 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 RPL3LQ92901 407 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC38A4Q969I6 547 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 TUBGCP3Q96CW5 907 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 RIPOR3Q96MK2 946 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 CCDC115Q96NT0 180 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 TUBB1Q9H4B7 451 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 DIABLOQ9NR28 239 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 SMPD4Q9NXE4 827 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 OR12D3Q9UGF7 316 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 PTGDR2Q9Y5Y4 395 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 PTCH2Q9Y6C5 1203 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 MYLKQ15746 1914 aa10.18□□□□□ -0.78
CHRNA1-202ENST00000348749 SYNJ2BP-COX16A0A087WUM0 186 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PNMA8CA0A1B0GUJ8 204 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 FADS2P1A8MWK0 482 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 LOC110117498-PIK3R3F6TDL0 507 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 POLR1CO15160 346 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 FGF10O15520 208 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 HCRTO43612 131 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TPPPO94811 219 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 WISP3O95389 354 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MED26O95402 600 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MT-ND2P03891 347 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CYBBP04839 570 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PCNAP12004 261 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TSPAN8P19075 237 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CES1P23141 567 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 S100A5P33763 92 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SOX11P35716 441 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PRIM2P49643 509 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 IL5RAQ01344 420 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GPR50Q13585 617 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 RAPSNQ13702 412 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GALNT3Q14435 633 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 STARD3Q14849 445 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TRIP4Q15650 581 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 RBM20Q5T481 1227 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CCNJQ5T5M9 372 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PRAMEF18Q5VWM3 479 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TIGD7Q6NT04 549 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ESRP1Q6NXG1 681 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TAPT1Q6NXT6 567 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 IDO2Q6ZQW0 420 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 OSTM1Q86WC4 334 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GATAD2AQ86YP4 633 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 NLGN4XQ8N0W4 816 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TMEM86AQ8N2M4 240 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 DPP10Q8N608 796 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ESX1Q8N693 406 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GTF3C2Q8WUA4 911 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PIK3R3Q92569 461 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms